| New model in OGS2.0 | DPOGS204845 |
|---|---|
| Genomic Position | scaffold443:- 78513-79337 |
| See gene structure | |
| CDS Length | 825 |
| Paired RNAseq reads | 967 |
| Single RNAseq reads | 3611 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011737 (5e-85) |
| Best Drosophila hit | transcription factor IIA L, isoform B (2e-43) |
| Best Human hit | transcription initiation factor IIA subunit 1 isoform 2 (1e-25) |
| Best NR hit (blastp) | tfiia large subunit [Aedes aegypti] (1e-55) |
| Best NR hit (blastx) | tfiia large subunit [Aedes aegypti] (8e-45) |
| GeneOntology terms | GO:0006367 transcription initiation from RNA polymerase II promoter GO:0016251 general RNA polymerase II transcription factor activity GO:0005672 transcription factor TFIIA complex GO:0005634 nucleus GO:0006357 regulation of transcription from RNA polymerase II promoter |
| InterPro families | IPR004855 Transcription factor IIA, alpha/beta subunit IPR009088 Transcription factor IIA, beta-barrel |
| Orthology group | MCL16064 |
Nucleotide sequence:
ATGGATCCCCCCCATCCCGATCCACCAACGATGCCTCCGCCACCCGTATTACTACAGAAT
TTTCCTAAAGCTAATGGAGGCAGTATATTACCTAAAAGAGCTCCAGATATGGCATCTCAA
AGTTCAAGCCACTCCGGAGGTGAGCATGGTGGTCCTACAAACATAGCCGGTGCTCATCCT
CACCATGGCATTGACCCAAATAATAAAGTGCCAGTGCAATTGACATTACCTGCTCAGCCT
GGTGTGCCTGGTTCACAGCCACGGTCATTTACTATTCAAATTCCAGCATCTGCCTTAAAT
GGGAACAAACTTCACCAAGTTTTGACAGGCCCTATAATAAATGCAACAATTAGTTTGCCG
CAACCCCTAGCTGCGACTCTTTTACAGCAACATATAAATTCAACATTAGCCGGTCAACAA
AATGAATTTGATGGAGGCGGGGGAGGTAGAAGTGGAGCGGCACCATTTTCTCTTGACGGT
GCATTAGATTCTTCTGATGATGAGGGTTCAATAGTTGGCGATGGTTCAGAAGAGGGTGCT
GGTGACGAGGACGAAGATGAGGAATCTGCGGAAGAGAGAGCAGAGGAAGAAGAGGAGGAA
AGAGATGAAAGTGGTGGGGCAGAGGAGGAACCACTCAACTCGGGGGATGATGTGTCCGAT
GAGGAACCAGGTGACATGTTCGACACTGACAATGTAGTGGTTTGTCAATACGATAAAATC
ACACGCAGCCGTAACAAGTGGAAGTTCCATTTAAAAGATGGTATAATGAATTTATCGGGT
AAAGATTATGTCTTTCAAAAAGCCAACGGTGATGCGGAATGGTGA
Protein sequence:
MDPPHPDPPTMPPPPVLLQNFPKANGGSILPKRAPDMASQSSSHSGGEHGGPTNIAGAHP
HHGIDPNNKVPVQLTLPAQPGVPGSQPRSFTIQIPASALNGNKLHQVLTGPIINATISLP
QPLAATLLQQHINSTLAGQQNEFDGGGGGRSGAAPFSLDGALDSSDDEGSIVGDGSEEGA
GDEDEDEESAEERAEEEEEERDESGGAEEEPLNSGDDVSDEEPGDMFDTDNVVVCQYDKI
TRSRNKWKFHLKDGIMNLSGKDYVFQKANGDAEW