| New model in OGS2.0 | DPOGS200480 |
|---|---|
| Genomic Position | scaffold823:- 17091-30140 |
| See gene structure | |
| CDS Length | 5553 |
| Paired RNAseq reads | 2312 |
| Single RNAseq reads | 5382 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010415 (2e-11) |
| Best Drosophila hit | Cad88C (0.0) |
| Best Human hit | cadherin-23 isoform 1 (3e-149) |
| Best NR hit (blastp) | PREDICTED: similar to Cad88C CG3389-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Cad88C CG3389-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005887 integral to plasma membrane GO:0016339 calcium-dependent cell-cell adhesion GO:0007156 homophilic cell adhesion GO:0005886 plasma membrane GO:0005509 calcium ion binding GO:0007424 open tracheal system development |
| InterPro families | IPR020894 Cadherin conserved site IPR002126 Cadherin IPR015919 Cadherin-like |
| Orthology group | MCL16175 |
Nucleotide sequence:
ATGATCTGTGTAGAAGTCATATCAGCAAACAGACCACCACGGTTTCTTATAGACGGACGT
TCAGAAATCGTGATCAGATTAAAAGAAGGTCCAGATACACCAGTTGGAAGTTTAATTTAC
CGATTAAGAGGCGTTGACTCCGATGGAGATACTTTGCGATTTGGTATAAGAGAGCAAGTC
GGAAGTGATATATTAAGAATAGAAGCCATTTCGTCCAACGAAGCTAATATATATTTAGTT
AAGGAATTAGATAGAGAGATTCGCGATGAATACTCATTTGTATTAACCCTGACTGATGGT
CATTTGGGGGAAGGTAATTATATAACCCAAAGTTTTTTGCTACTAGTAGAGGACGTCAAT
GACAACGAACCTATATTTAAACCGTATCCTCCGGCTATCACTGTGAAGGAAGATGCATTA
CCTGGAGTATTGCTTACTGTTGAAGCAACTGATCTTGATGAGGGTGCATATGGCCAAGTT
CTATACAATTTACAAGAACTAGATGGCGATGTAGACAACTTTGCCATTCAAACTGTAAAC
GGGAAGGGAGTTATACGACTAACAAATCGGCTAGACTACGAGCGGAAATCCCTTTACCAA
TTGCGGGTTCTGGCTATAGATAGAGCAAACCAGGGCCGTGTTAATACTGGAACTGCTGCT
ATCTTAGTAAAAGTGCAGGATGTTGAAGACCAACCTCCAGAGTTTGTGGTCGCGAGCCCA
GTTACCAGAATCAGTGAAGATGCGCCGGTTGGAACGTCTGTTTTACAAGTCAGGGCAATT
GATGGTGATAGGGGCATCAACAACAGAATCTCCTATAGCATTATATCTGGTGGAGAGGAA
CACTTTGATATTGACAGCAGTTCTGGGGTAGTGTACACCATCAGTCCTATAGACAGAGAA
GACCCTAATAATAGCAATGGAGCCTACATACTAGAGATATTGGCCACAGAGGAATCTCAT
ATGGTATCACCACTACCGAGTGCTACAACTGAGGTGACTGTCATTATAACCGATGTGAAT
GATGAAAAGCCCAAGTTTAAAAGCAATAGATATGTAGGAGAAATCATAGAAAATGCCCAA
CAAAACACACCAATAACCTTCCTACAGGATGGTGTGCCGGAAGTATTCGACTATGATCAG
GGTAAAAATGGGACTTTTGAATTATACTTAGTAGGTGACAATGGTGTTTTTGATGTCACA
CCTTTTAAGGGTATAAATGAGGCATCATTTTTAATAAGGGTCAATGATCCATCTTTCTTA
GATTACGAAAAGGTTACTGTAATGAATTTCAGCTTGGTTGCCAAAGAGATTGTTACCAAA
GAACCAAAAATGAGTATAGTGCCGATAACAGTTCATATAAAGGATGAAAATGACAACTTC
CCGGAGTTCACGGAGACCGTTTACACTGTATCAATACTTGAGAACTGTGCTGTTGGTACG
ACAGTGGCTTGGATTCAAGCAACCGATTCCGATTCAGATAGCTATGGAACTAGAGGCATC
AGATACACCGGCCTGACTGGCAGTGTTGCACATTTGTTACATTTGAATCCAATATCTGGT
GTGATAACAGTGAAGCAGGCCGGCGATGACAGTTTTGATAGGGAACTAGTGTCAAGACAT
TATGTGACTGTTGAGGCAAGGGATGATCAGGGCAAAGGAAACAGAAACACAGCACAATTA
ATAATAAATATAGAAGATGTGAATGACAACGCTCCAATGTTCCTCGCTAATAAATATGAG
GCAAGGTTGCTGGAGAACTCCTTGGACTTTGAAAATCCGCTTGTATTGGAAGCAAGAGAT
TTAGATTTGAACGGAACAAAAAATAGTCACATAGAATATTCTATAGTCGGTGGTGATTAC
AAAAACAATTTCTCAATAGATCCAAATCTAGGTATAATAATACCAATCGGCGGGATTGAC
TTCGAACAAATAGCGGGTGACAACACTAATATAAGGCCCATACATTTGACGGTCCAAGCT
CGTGACTTCGGCTCCCCTCCATTATCGTCCACAGTTCCCGTGACGGTGTATGTGGCGGAC
GTGAACGACCACGCCCCCTCGTTCACACAGACGGTGTACAAGCGGGCCATCCCGGAGGAT
ATGCCGGGGGGAACTAGTGTTATAGAGGTCAAAGCCCGCGATTCAGACGGCTCGTCTCCC
AACAATCGTGTGGTTTATCGTATACAACGCGGCGCCAGCGACAAGTTTGTTATAGACTCC
TTCTCGGGACTGATCTCCGTGGCTGCCGGAGCCAATCTGGACCCGGACCGGACCGAGCCC
ACCACTAACAGATATGTACTCACTGTGGTAGCTTTAGATGGTGGTATAGGAGACCAACAG
CTGAGCGCGTCTGTCATTGTAAATATAACGATAGTGGATGTTAACAACAAACCACCAGTA
TTGGTTGAACCCGGACTCGTACACGTCATGGAAAACACACAGGTGGGTACAGTAATATAT
CGGGCCCACGCATATGATCTCGACGAACAACCAGTGTTGAGATTTTCCATAGACAAGGAA
TTAAGTTCCGGACGAAATGAGGATGGCGTCCCGGTGACTATCAACGACTACGACTATATA
GGGATATGGGATCTGAACACTATCGACGGCACCCTGAGGATTGTTAGATCTTTGGACAGA
GAGAAAGTGGAAATTATAAAACTGGTGATCACAGTCGAGGATATGGCGGCCATGAGTAAC
GGACCAGTGCAGAGAGCTTCCGCTATACTGACGGTTATAGTACAAGACGAGAATGACAAC
AACCCCAAATACAGGAAACCATTCTACAAGACCTCCATCACAGAGAACTCTAAGAACGGC
GTCCATATTGAAACTGTCATAGCGGACGACGCCGACAGGAACAGAACTATGACGTATATG
TTGGAAGGTCCGGAGGAGATATTAGGGCTGGTACACATGGACAGTTCTACGGGGGAAGTG
GTGGTAGCCAACAGAATAGACCACGAGCTACAGCCTTGGATCAATGTGACCGTCAAGGCT
ACGGACAGCGGAACGCCGCCCAGATCCGCGGCGGTGGAGCTGGTGATACAGGTATTGGAT
GAAAACGACAACAATCCTATATTCGAGCCTTCGTCTTTCGAATACAGAGTAAGAGAGGAC
ATAGAGCCCGGCAGTACTGTAGCCGATATTGTAGCGAGAGATGCTGACTCGGGCGAATAT
GGAAAGATTACGTACTTACTGGACAGAGTCTCTACACAGGGCAAGTTCCTAATAAACCCG
GAAACGGGGGCGCTGAAGGTGTCCGATTATCTGGATCGAGAGACGCAAGCGAGTTACAAC
CTGGTGGTAGAGGCCTGGGATAACTATCAGTTCGGATACCTCAGCGGGGAGAGTCGGAAC
GCGTTCAAACAGATCGTTATCCACGTAGAGGACGTGAACGACAACCCGCCCGTCCTCACC
CTGCCTACAGGCTGCACGACTATATCCGAGTTCCACAACCACCGCGAGCCGATACTGTCG
GTGACGGCGAGCGACGCAGACGACACCGCCACGCCCAACGGACGAGTACAATTCCATCTG
GTGGGGGGAAAGGGACACGATCTGTTCCGTTTCGAGCAAGTCGGCGGCGACGCTAACACC
GGCCGTCTGTACGCGAAGCAACCGCTGAAAGATCGCTTCGGCAACTACACCTTCATCATA
GAGGCCAGGGATCTCGGCCTACCCTCCAACGTCGTCAGAGACGAATTGAATCTATGTGTC
ACAGATTACAACGATCACGCGCCAGTGTTCGTACATCCGCCGCAGAATGTCACCATTAAA
GTGCCGGAAAATGCAACAATAGGCACAACAGTGGTCGAAGTGAAGGCTATAGACGCTGAC
ATCGGGCCTAATGGCGCAGTCCGCTATAGACTGCGACACGACGCTCGCGGCTCATACAGG
ACCTTCACTATACATCCCACCAGCGGAGCCCTACGGACCACCGGAGCGCTAGACAGAGAC
AAACAAACAACCTACCAGCTGAGAATAGAAGCCTACGACCTCGGCCTGCCAACTCCTCTC
AGCTCCGACTTGGATCTTACAATTTACGTCCAAAACGTGGACAACTATAAGCCGAGGTTC
CCCGACAGACGGCTGCATTTAAATATAACGGAAAATGAAGAATTCTCTACGACGCTACCG
AGAGTGCTGGAGAGAGACGAGATCGACCGAGGCGACGAGCCGATGCTGCCCGTGTGTTAC
TACATCGTGGACGGAAATGATGAAGGCTTGTTTGAACTCGACAGGGCTACGTACAGATTC
AAATCAAAACCGTTAGACAGAGAACAAAAAGATCAGTACTTGATAACGGTTCTAGCAACA
GAGGACTGTGTACGGCCAGACTATGAAGCTAGTGAGGACTCAAGTACACTACAGATATAC
ATTAATATACAGGATGTGAACGATAACGCGCCTCAGTTCATCAGCAAAATGTTCACTGGT
GGGATCACAACAGAAGCGGACTTTGGAATTGAGTTTATGCACGTCAAGGCCATAGACCAA
GACGATGGTGTGAACGCTAAGATAAACTATTATCTTCTTGGTGAGGTCAAGGAGACCTTA
ACTGAGGGTCTGGAAAATTTGGCGGTGTCACCTTTCCTGGTAGACGTCGACACGGGAGCT
GTGACCTTGAACTTTGACCCTCAGAAGGGAATGAAGGGCTACTTCGACTTCAAGGTATTA
GCGAACGACACAGACGGTTTGCAGGACGAGGCTCACGTCTTCATATATCTGCTCCGCGAG
GATCAAAGGGTGCGTTTCGTTTTACGTTCCCATCCTTCGGAGATACGTGATAAAATAAAC
ATATTCAGAGAGAGGTTGGCGCGTGTAACGGAATCCGTGGTCAATATAGACGACTTGAGG
GTGCATGAAAATAAAGACGGGTCCGTAGACAACACCAAGACGGATCTGTACCTGCACCTG
GTGAACAGCGGCGACCACTCGGTGCTGGAAGTGGAGCAAGTCCTCAAGATAGTGGACAAG
AACATCGAACACCTGGACGACCTGTTCAAAGAGTTCAACGTCCTGGACACCCAGCCGGCG
GAGTACCAGCCCTTGACGGCTGACACGCTGTCGTCCCAGCAGGCCGTGTTCTGGCTGGTG
TGGACCGCCGGCATACTGAGCGCGTTGCTGGCGGTCACCGTCATCATGTGTCTCTCGCAG
AGAGCTGACTTCACCAGGAGACTGAGGGCCGCCACCACCGCCTACTCTTCCCAAACGTCG
GGCGAAGCTGACATGACGATACGAAGTTCGGGAGGTAGAGTCCCGAATACAAACAAACAC
AGCACCAAGGGCTCCAACCCTATATGGCTACACGCGTACGAAAACGACTGGTACAAGACA
GACGATCAAATGAGTCACTCGGAACGAGACTCGCTGGACGAGAACGCCGTCGACCAGGAC
CTCAGCAACGACAAGCCGTACTTCATAACGACCTACCCGAGTGGGGACCAGGACCTGGAC
AACCACAACGACCTGGACCACCGAGGATACGACTTCTACCAGCAGCTGGAACAGGTGAAG
AACGCCAAGAACATGGAGACCACGGAACTCTAA
Protein sequence:
MICVEVISANRPPRFLIDGRSEIVIRLKEGPDTPVGSLIYRLRGVDSDGDTLRFGIREQV
GSDILRIEAISSNEANIYLVKELDREIRDEYSFVLTLTDGHLGEGNYITQSFLLLVEDVN
DNEPIFKPYPPAITVKEDALPGVLLTVEATDLDEGAYGQVLYNLQELDGDVDNFAIQTVN
GKGVIRLTNRLDYERKSLYQLRVLAIDRANQGRVNTGTAAILVKVQDVEDQPPEFVVASP
VTRISEDAPVGTSVLQVRAIDGDRGINNRISYSIISGGEEHFDIDSSSGVVYTISPIDRE
DPNNSNGAYILEILATEESHMVSPLPSATTEVTVIITDVNDEKPKFKSNRYVGEIIENAQ
QNTPITFLQDGVPEVFDYDQGKNGTFELYLVGDNGVFDVTPFKGINEASFLIRVNDPSFL
DYEKVTVMNFSLVAKEIVTKEPKMSIVPITVHIKDENDNFPEFTETVYTVSILENCAVGT
TVAWIQATDSDSDSYGTRGIRYTGLTGSVAHLLHLNPISGVITVKQAGDDSFDRELVSRH
YVTVEARDDQGKGNRNTAQLIINIEDVNDNAPMFLANKYEARLLENSLDFENPLVLEARD
LDLNGTKNSHIEYSIVGGDYKNNFSIDPNLGIIIPIGGIDFEQIAGDNTNIRPIHLTVQA
RDFGSPPLSSTVPVTVYVADVNDHAPSFTQTVYKRAIPEDMPGGTSVIEVKARDSDGSSP
NNRVVYRIQRGASDKFVIDSFSGLISVAAGANLDPDRTEPTTNRYVLTVVALDGGIGDQQ
LSASVIVNITIVDVNNKPPVLVEPGLVHVMENTQVGTVIYRAHAYDLDEQPVLRFSIDKE
LSSGRNEDGVPVTINDYDYIGIWDLNTIDGTLRIVRSLDREKVEIIKLVITVEDMAAMSN
GPVQRASAILTVIVQDENDNNPKYRKPFYKTSITENSKNGVHIETVIADDADRNRTMTYM
LEGPEEILGLVHMDSSTGEVVVANRIDHELQPWINVTVKATDSGTPPRSAAVELVIQVLD
ENDNNPIFEPSSFEYRVREDIEPGSTVADIVARDADSGEYGKITYLLDRVSTQGKFLINP
ETGALKVSDYLDRETQASYNLVVEAWDNYQFGYLSGESRNAFKQIVIHVEDVNDNPPVLT
LPTGCTTISEFHNHREPILSVTASDADDTATPNGRVQFHLVGGKGHDLFRFEQVGGDANT
GRLYAKQPLKDRFGNYTFIIEARDLGLPSNVVRDELNLCVTDYNDHAPVFVHPPQNVTIK
VPENATIGTTVVEVKAIDADIGPNGAVRYRLRHDARGSYRTFTIHPTSGALRTTGALDRD
KQTTYQLRIEAYDLGLPTPLSSDLDLTIYVQNVDNYKPRFPDRRLHLNITENEEFSTTLP
RVLERDEIDRGDEPMLPVCYYIVDGNDEGLFELDRATYRFKSKPLDREQKDQYLITVLAT
EDCVRPDYEASEDSSTLQIYINIQDVNDNAPQFISKMFTGGITTEADFGIEFMHVKAIDQ
DDGVNAKINYYLLGEVKETLTEGLENLAVSPFLVDVDTGAVTLNFDPQKGMKGYFDFKVL
ANDTDGLQDEAHVFIYLLREDQRVRFVLRSHPSEIRDKINIFRERLARVTESVVNIDDLR
VHENKDGSVDNTKTDLYLHLVNSGDHSVLEVEQVLKIVDKNIEHLDDLFKEFNVLDTQPA
EYQPLTADTLSSQQAVFWLVWTAGILSALLAVTVIMCLSQRADFTRRLRAATTAYSSQTS
GEADMTIRSSGGRVPNTNKHSTKGSNPIWLHAYENDWYKTDDQMSHSERDSLDENAVDQD
LSNDKPYFITTYPSGDQDLDNHNDLDHRGYDFYQQLEQVKNAKNMETTEL