| New model in OGS2.0 | DPOGS209424 |
|---|---|
| Genomic Position | scaffold2157:+ 7246-9417 |
| See gene structure | |
| CDS Length | 555 |
| Paired RNAseq reads | 97 |
| Single RNAseq reads | 246 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006444 (9e-96) |
| Best Drosophila hit | sarcoplasmic calcium-binding protein 2 (3e-64) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to Sarcoplasmic calcium-binding protein 2 CG14904-PA [Tribolium castaneum] (3e-71) |
| Best NR hit (blastx) | PREDICTED: similar to Sarcoplasmic calcium-binding protein 2 CG14904-PA [Tribolium castaneum] (3e-72) |
| GeneOntology terms | GO:0016529 sarcoplasmic reticulum GO:0003924 GTPase activity GO:0005509 calcium ion binding |
| InterPro families | IPR018247 EF-Hand 1, calcium-binding site IPR018249 EF-HAND 2 IPR011992 EF-hand-like domain |
| Orthology group | MCL16131 |
Nucleotide sequence:
ATGTCCATCTCTGAATTCAGGAGGAAGAAGCTTCTTTACGTCTTCAATGTTTTCTTCGAT
GTCAATCAGAGCGGTACCATTGAAAGGAAGGATTTCGAGTTGGCCATTGAGAAAATCTGC
AGTCTCCGCGGCTGGAAACCTGGAGACCCAAAGAACACTGAAACTCACGAGATTATGATC
AAGATCTGGGAAGGGCTCAGGAAGAGAGCTGATTCTAACAAGGATGGCCAGGTGTCAGTA
GAGGAATGGGTTTCTATGTGGAACGATTATGCTCAGAACCCGTCCGCAGCATTGCAATGG
CAGCAATTATATGCTCAGTTCATGTTTCAACTGGAGGACGCCAGTGCTGATGGTACCATA
GATTGTGATGAATTCACCACCGTTTGCTCTTCTTATGGTATTAACCCCCAGGAGTGTAAG
GTGGCTTTTGGCAAGATGGCCAAGGGCAAGGCGAGTGTCTCTTGGGAGGAGTTCCAGGAT
TTGTGGAAGGAATATTTCTCTACGGAAGATCCTAACGCGTCAGGAAATTTTATATTCGGC
AGAACTAGTTTCTAA
Protein sequence:
MSISEFRRKKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDPKNTETHEIMI
KIWEGLRKRADSNKDGQVSVEEWVSMWNDYAQNPSAALQWQQLYAQFMFQLEDASADGTI
DCDEFTTVCSSYGINPQECKVAFGKMAKGKASVSWEEFQDLWKEYFSTEDPNASGNFIFG
RTSF