| New model in OGS2.0 | DPOGS207649 |
|---|---|
| Genomic Position | scaffold1953:- 35741-39722 |
| See gene structure | |
| CDS Length | 717 |
| Paired RNAseq reads | 146 |
| Single RNAseq reads | 1688 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010431 (6e-21) |
| Best Drosophila hit | bruno-2, isoform D (3e-35) |
| Best Human hit | CUGBP Elav-like family member 2 isoform 3 (6e-33) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC012080 [Tribolium castaneum] (1e-53) |
| Best NR hit (blastx) | RNA binding protein NAPOR-3, putative [Ixodes scapularis] (9e-34) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0000166 nucleotide binding GO:0017148 negative regulation of translation GO:0003723 RNA binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL10773 |
Nucleotide sequence:
ATGGAAGGCTGTTCAGCGCCGTTGGTGGTAAAATTCGCTGATACCCAGAAGGAGAAAGAA
CAGAAAAAGTTACAGGCCATGCAAGCGAGTTTATGGGGGCTTACGACTCCTGTAGCCCCT
ACTTACCTAGCGTCGGAAGCGGCGCTATCACCAGCAACGCAGCTGCAACTGCTGCAACAG
CTGCAGGCAGTCGGGCTTCAGCAGCAATTACTGCAAGGTCAAGGGTCAACTTTATTACAA
GGTGTTAACTATCCAGATGTCGGTTTCAATGGCGCAGGGCTGGGCGGTGGTGTCGGTGTT
AGCGCTGGTGGTGAACAGCTAGGTGGCCTGCTGGCACCTGTCAGCGTACAGAACTTAGCG
GCGCTGGCAGCCATGACGCAACCTGTCACGCAAGCAGCACCCATAGCTCAACCAGCGGCA
CCTCAACCCGCAGCACCCCAATTATGGCCAGAAGGCGGTAACCTGTTTATTTATCACTTG
CCCCAGGAGTTCACAGATACGGACTTGGCGTCCACGTTTCTACCATTCGGCCACGTGATA
TCAGCTAAAGTGTTCATAGACAAACAGACCAACCTATCAAAGTGCTTTGGTTTCGTATCG
TACGATAACGCAGCCTCCGCGCAAGCCGCCATCCAAGCGATGAACGGCTTCCAGATAGGT
ACAAAAAGACTAAAGGTTCAGTTGAAACGTTCGAAAGAACTTTCTAGACCGTACTAG
Protein sequence:
MEGCSAPLVVKFADTQKEKEQKKLQAMQASLWGLTTPVAPTYLASEAALSPATQLQLLQQ
LQAVGLQQQLLQGQGSTLLQGVNYPDVGFNGAGLGGGVGVSAGGEQLGGLLAPVSVQNLA
ALAAMTQPVTQAAPIAQPAAPQPAAPQLWPEGGNLFIYHLPQEFTDTDLASTFLPFGHVI
SAKVFIDKQTNLSKCFGFVSYDNAASAQAAIQAMNGFQIGTKRLKVQLKRSKELSRPY