| New model in OGS2.0 | DPOGS212180 |
|---|---|
| Genomic Position | scaffold1128:+ 21532-32930 |
| See gene structure | |
| CDS Length | 2457 |
| Paired RNAseq reads | 200 |
| Single RNAseq reads | 557 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006716 (1e-63) |
| Best Drosophila hit | alphaPS4 (2e-16) |
| Best Human hit | integrin alpha-4 precursor (6e-23) |
| Best NR hit (blastp) | hemocyte-specific integrin alpha subunit 1 [Manduca sexta] (7e-96) |
| Best NR hit (blastx) | hemocyte-specific integrin alpha subunit 1 [Manduca sexta] (5e-92) |
| GeneOntology terms | GO:0008305 integrin complex GO:0005886 plasma membrane GO:0042802 identical protein binding GO:0007157 heterophilic cell-cell adhesion GO:0001968 fibronectin binding GO:0007507 heart development GO:0009986 cell surface GO:0005515 protein binding GO:0007155 cell adhesion GO:0016477 cell migration GO:0030183 B cell differentiation GO:0060710 chorio-allantoic fusion GO:0007159 leukocyte cell-cell adhesion GO:0007229 integrin-mediated signaling pathway GO:0001974 blood vessel remodeling GO:0009897 external side of plasma membrane GO:0004872 receptor activity GO:0016021 integral to membrane GO:0060324 face development |
| InterPro families | IPR000413 Integrin alpha chain IPR013519 Integrin alpha beta-propellor IPR013517 FG-GAP |
| Orthology group | MCL19909 |
Nucleotide sequence:
ATGCCGGTTGGAGTACCTCAAGACGCGAAGGCTAAATTATTACCATCCTTGAATTTCTTC
AAGAGATGCCGGGATCACGACATCATACAAACATGTGTCGAAATATCACCTAAAAAAGAC
ATCAAACATAGCGACAGGATACTCCATCAGGCAAGTGAAATTATTCTGATGCTTTTGAAA
GTTCTACCAATTCTATCAGTTTATCATGAACCATCTATGATAGTCATCTCTCTACCAAAC
GGTTCACAACCAGATGCCATGTTGGGATTTAGTATGGCCTATTACAATAAGCACCTATTC
ATAAGCGCTCCAAAATATGGTAATGGTAGAATCTTTGATTATGATGTTTTAAAAAATAAA
AGTGTTAAAGAAATCTCTCTTCCTAATGTAGATGATTCCGGCCTTGACACAGCAGGCTGG
AGCATAGAAGTTGACGCTGAAGATTTTGTACTAATTGGAAGTCCTGCAGTGAGCTTAAGA
GGAATCGTGAAATTTTACCACAACCAGAGGGCGCTGCCGAGAGTTTTTCTGAATTTGATT
AAAAGTTATAATTTTGGTTACGCCATCGCAAGCGGAAACTTTCTATCAGATAACGAAATA
TGTTATGCAATTAGTACAACTTTTGGTGATTTTGGAGAAGGGATGGTCTTTATCTTAAAT
AAGGACAACAAAGAGTTGCTCAGACTATCTGGCACTGAAGTAGGCGGATTGTATGGAGCT
GCTTTGTGTAAAGTTAACTTGTATGGATCAAGATCCAGTCTTCTTGTTGGATCTCCTACA
TTTTCAGAAAGATCTGACCGTTATGACAACGGCGCTGTGTATTTGTATGTGAATGAAGGG
GCTAAGGATTTGACATTAAAAAGAATTATAAAAGGAAACAAAAACGGTGGATACTTCGGT
TTCGCTATCGCTAGTTTAGGAGACTTGGATGGCGACGGACGCGAGGAAGTCGCGATAGGA
GCACCATACGAAGACGACTTGAAGGGTGCTGTGTACATATATACTGGAGCTAGTCTCTTG
TCTGGGAATACGTGGTTACAGAAGATTCAACCGGAGGAATATCAAACCATTGGACATAGT
CTGGTTCCTTTAGATAATTGTTTTAACAGCGGATGTAACGAATTAGCAGTTGGAGCACCA
TTTAGCGATAAAGCCTTTATATTGAAGTGCAACAGTCATATCACAGTAAATTTAGAAGCA
TTCTTTCCAAACATACAGATGAGAACGAACAGAACATTTTTTGTATTCGCTGTTTGTACT
AATATAGAGTATCCAAAAAAACATAGCATAAATTCAAGTATCTCCATTAAGGTGGATATA
AATCACCCGGATGCATCATTGGAAAATGAAAATGGTACATTTGCGTTTCCCATTGGTTCT
GACGTATTATATTGCAAGAACGTCACCGTCTTAACGCCGATCGAAGGTAATTATGATGAA
CTGATAGCGTACAAAATATCAGCCTCATTAAGCAATGTAGCGAACAATGAATACTCAAGC
TCGCGGGCTGTGCTCAGCGAGAGGAGCAAGGTTGAAATACAAGGACAAGTGTCTGCTGCT
GACTGTGAGGGCCGAGAAAGATGTGTTCCTATATTAACCGCTACATTACAATCAAATATT
ACTGAACCATTTGTCGTTGGTTCAGACAACGCGAGCTTTTCGTTGTCCTTGCTCAATTCG
GGCGAGTCTGCTTACTCCGCGTGTGCCCACGTGCTCGTGTCCGGCGCCCACGTGTTCCGA
CACCCGAGTACTTGCACACGCCCTGATCAGACAGAACAAGTCATTTGTAAGCCGGCGAGA
CCTATAACCACTAATGATGTTTGGAGAATCGGAGAAATACAAATTGATACCGATACATTG
ACGAGCGAAGACGAAAACATTACCATAACATACGTTGTATACAGTCATTGCAACAATCAC
GACGACAGAAAAAAATATGAAAAAATAATCCGTCTCGGTTACGACACAGAAGGAATCGTT
GTAAATGGTATATCCAATCCTAGTGATTTAGTAAATTTTACTTCAGAGGACGCCGCAAAG
AAACAGCAGCTGGAGCATGTCTATTTGATCACAAATAACGGCTTAACTCATTGGGTTGGT
GTTAAATGTGAAGTCTTACTTGAGAAGAGTCCCTACTTCAATTACAGTGTGTCTGTAGAT
GACATCATACGCGCTGGAAACGCTTACGTCGTGACTAGGCTTGCCGTTTTACTGAAACAA
GAACGATTAGTCCAGAGGTTAACAACAAAGTTAGCTCTAGTATCCACCTCTGCTCCCGCT
TGGATAATTATCTTAGCTCTTCTATTGGGGCTAATCATTATATGTTTAATAATATATGTT
TTATATAAGAAAAAATGTTTTCAAAGAAAAAATAAAAAGAAACTGAACAATTTGAAAGCA
TCACTTTATATTAAAGATCGGGGAAATAGAGACGATTGCGATTCAGATTCAAATTAG
Protein sequence:
MPVGVPQDAKAKLLPSLNFFKRCRDHDIIQTCVEISPKKDIKHSDRILHQASEIILMLLK
VLPILSVYHEPSMIVISLPNGSQPDAMLGFSMAYYNKHLFISAPKYGNGRIFDYDVLKNK
SVKEISLPNVDDSGLDTAGWSIEVDAEDFVLIGSPAVSLRGIVKFYHNQRALPRVFLNLI
KSYNFGYAIASGNFLSDNEICYAISTTFGDFGEGMVFILNKDNKELLRLSGTEVGGLYGA
ALCKVNLYGSRSSLLVGSPTFSERSDRYDNGAVYLYVNEGAKDLTLKRIIKGNKNGGYFG
FAIASLGDLDGDGREEVAIGAPYEDDLKGAVYIYTGASLLSGNTWLQKIQPEEYQTIGHS
LVPLDNCFNSGCNELAVGAPFSDKAFILKCNSHITVNLEAFFPNIQMRTNRTFFVFAVCT
NIEYPKKHSINSSISIKVDINHPDASLENENGTFAFPIGSDVLYCKNVTVLTPIEGNYDE
LIAYKISASLSNVANNEYSSSRAVLSERSKVEIQGQVSAADCEGRERCVPILTATLQSNI
TEPFVVGSDNASFSLSLLNSGESAYSACAHVLVSGAHVFRHPSTCTRPDQTEQVICKPAR
PITTNDVWRIGEIQIDTDTLTSEDENITITYVVYSHCNNHDDRKKYEKIIRLGYDTEGIV
VNGISNPSDLVNFTSEDAAKKQQLEHVYLITNNGLTHWVGVKCEVLLEKSPYFNYSVSVD
DIIRAGNAYVVTRLAVLLKQERLVQRLTTKLALVSTSAPAWIIILALLLGLIIICLIIYV
LYKKKCFQRKNKKKLNNLKASLYIKDRGNRDDCDSDSN