| New model in OGS2.0 | DPOGS211103 |
|---|---|
| Genomic Position | scaffold167:+ 31756-34160 |
| See gene structure | |
| CDS Length | 1749 |
| Paired RNAseq reads | 472 |
| Single RNAseq reads | 1286 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002978 (0.0) |
| Best Drosophila hit | TM9SF4 (0.0) |
| Best Human hit | transmembrane 9 superfamily member 4 precursor (0.0) |
| Best NR hit (blastp) | transmembrane 9 superfamily protein member 4 [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | transmembrane 9 superfamily protein member 4 [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0005768 endosome GO:0005215 transporter activity GO:0016021 integral to membrane GO:0006911 phagocytosis, engulfment GO:0006909 phagocytosis GO:0050829 defense response to Gram-negative bacterium GO:0035010 encapsulation of foreign target |
| InterPro families | IPR004240 Nonaspanin (TM9SF) |
| Orthology group | MCL13792 |
Nucleotide sequence:
ATGACAAGTATACATACGCAATTACCATACGAGTATTATTCCTTACCCTTATGTATTCCT
AAAAATGGAACATTTATATACAAATCAGAAAATTTAGGCGAAGTTTTGAGAGGTGATCGT
ATTGTGAATACTAATTACGAAGTTCATATGGCAGAGAATATCAAATGCAAACTTTTGTGT
CACAAAAGAAATAATCCAATGAACTGGAGCGTGGAGGAATCTGAGAAGGTTGCGAGTCGA
ATTGAACATGAATACTTTGTACATTTATTAGTTGATAACTTACCAGTTGCAACAAAGATT
ATAAATATTGATACTTCTGAAAGAACTATAGAACAAGGATATCGTCTAGGTTTTATGTCA
AAAGGAAAGGCATATATAAATAACCATCTGAAGCTTCTTCTGAAATATCACAGACACAGT
CAGGATTCTTACAGAGTTGTTGGCTTTGAAGTTGAGACATTTTCTGTGGACAAAGATCAC
TTGACATTCATTGATGATAACTATTGTCAAATTGGATCAGACATTAAACCACAACTTGTA
AATGAGGATACGGGAACTAAATTGTACTTTACATATTCTGTGGAATGGGGAGAATCAGAT
ATTGAATGGGCGTCAAGATGGGATATATATTTGGGCATGAAAGATGTTCAAATACATTGG
TTTTCTATTGTCAATTCAATTGTTGTTCTTTTTTTCCTCTCAGGTATCCTAACTATGATA
ATGGTGAGAACACTCAGACGAGACATAGCTAAATACAATTCAGATGAAAATATTGAAGAT
ATGATAGAAGAAACAGGTTGGAAGTTAGTTCACGGCGATGTCTTTAGACCGCCACCTAAA
AGAATGCTTTTCGCAGCTGTTATAGGAAGCGGCATACAAATTTTCCTTATGGCCCTTATC
ACAATTTTCATTGCAATGCTTGGAATGCTGTCCCCTGCTAGTCGAGGTGCGCTTATGACA
TCTGCAATATTGTTGTATGTCTTTATGGGACTAATAGCTGGCTATTATTCAGCGAGATTG
TACAACACAATGAAAGGCAAACAGTGGAAGCAAGCTGCATTTTTAACATCTACATTATAC
CCGGCTATTGTTTTTGGGACATGTTTCTTTTTAAATTTCTTCATTATGGGAAAACACTCC
AGTGGCGCCGTGCCATTTTCGACGATGTTGGCACTTTTATGTCTGTGGTTCTGCATATCT
GTACCTTTAGTGTATTTTGGTTATTATTTCGGATGTCGGAAACAACCATTTCAGCATCCA
GTGCGTACAAACTTTATTCCGAGGAAAGTACCAGAACAAGTTTGGTATATGAACACATTA
ATTTGTATAATGATGGCCGGCATACTGCCATTTGGAGCTGTATTCATAGAATTATTTTTC
ATTTTCAATGCGATATGGGAGAATCAGTTCTATTACCTCTTTGGATTTTTATTTCTGGTT
TTTTGCATACTTGTTGTATCTGTCTCCCAAATATCCATTGTAATGGTATACTTTCAACTC
TGTGGCGAGGATTATCATTGGTGGTGGAAGAGCTTCATCATCTCCGGAGGATCTGCAGTT
TATATTTTAATTTACTCAATATTTTACTTCTTCACAAAGTTAGAAATAACTGAATTTATA
CCAACATTACTTTATATTGGCTACACAGGTCTAATGGTACTGACATTCTGGCTTTTGACT
GGGACTATTGGATTCTTTGCAGCTTATACATTCATCAGGAAAATCTATGCAGCAGTTAAA
ATTGATTAA
Protein sequence:
MTSIHTQLPYEYYSLPLCIPKNGTFIYKSENLGEVLRGDRIVNTNYEVHMAENIKCKLLC
HKRNNPMNWSVEESEKVASRIEHEYFVHLLVDNLPVATKIINIDTSERTIEQGYRLGFMS
KGKAYINNHLKLLLKYHRHSQDSYRVVGFEVETFSVDKDHLTFIDDNYCQIGSDIKPQLV
NEDTGTKLYFTYSVEWGESDIEWASRWDIYLGMKDVQIHWFSIVNSIVVLFFLSGILTMI
MVRTLRRDIAKYNSDENIEDMIEETGWKLVHGDVFRPPPKRMLFAAVIGSGIQIFLMALI
TIFIAMLGMLSPASRGALMTSAILLYVFMGLIAGYYSARLYNTMKGKQWKQAAFLTSTLY
PAIVFGTCFFLNFFIMGKHSSGAVPFSTMLALLCLWFCISVPLVYFGYYFGCRKQPFQHP
VRTNFIPRKVPEQVWYMNTLICIMMAGILPFGAVFIELFFIFNAIWENQFYYLFGFLFLV
FCILVVSVSQISIVMVYFQLCGEDYHWWWKSFIISGGSAVYILIYSIFYFFTKLEITEFI
PTLLYIGYTGLMVLTFWLLTGTIGFFAAYTFIRKIYAAVKID