DPOGS200022 | ||
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Transcript | DPOGS200022-TA | 882 bp |
Protein | DPOGS200022-PA | 293 aa |
Genomic position | DPSCF300337 - 205723-212351 | |
RNAseq coverage | 952x (Rank: top 13%) |
Annotation | ||||
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Heliconius | HMEL003676 | 5e-136 | 75.09% |   |
Bombyx | BGIBMGA012441-TA | 6e-137 | 75.09% |   |
Drosophila | CG10026-PB | 5e-46 | 33.90% |   |
EBI UniRef50 | UniRef50_D6WK77 | 3e-53 | 38.65% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WK77_TRICA |
NCBI RefSeq | XP_001606243.1 | 6e-60 | 41.79% | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] |
NCBI nr blastp | gi|345494155 | 9e-59 | 41.79% | PREDICTED: alpha-tocopherol transfer protein-like isoform 1 [Nasonia vitripennis] |
NCBI nr blastx | gi|345494155 | 7e-58 | 41.37% | PREDICTED: alpha-tocopherol transfer protein-like isoform 1 [Nasonia vitripennis] |
Group | ||||
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Gene Ontology | GO:0006810 | 4.1e-15 | transport | |
GO:0005622 | 4.1e-15 | intracellular | ||
GO:0005215 | 4.1e-15 | transporter activity | ||
KEGG pathway |   | |||
InterPro domain | [100-283] IPR001251 | 1.4e-38 | Cellular retinaldehyde-binding/triple function, C-terminal | |
[22-102] IPR011074 | 1.5e-19 | Phosphatidylinositol transfer protein-like, N-terminal | ||
[63-85] IPR001071 | 4.1e-15 | Cellular retinaldehyde binding/alpha-tocopherol transport | ||
[50-85] IPR008273 | 6.8e-10 | Cellular retinaldehyde-binding/triple function, N-terminal | ||
Orthology group | MCL25968 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200022-TA
ATGTATGAATGCTTCCTTGAGATAGCGTTCGAGGCTGAACTGAATACAAAAGAAGACCCTGAGCTGCTTGAACTAGCACCCGAACTATGCAACGAGGACGCGTCCACCAGGGCCACGGCCGTCACAAATCTCAGGAATATGATTTTCGAAAGAGCAGAATGCAAACCTCATCGGACAGATGACGCGTTCCTCCTGAGGTTTCTCCGAGCGAGAGACTTCATAGTACCGAGAGCGCATAAACTCCTAGTCCGCTATTACACGTTCCGGGCGGAATATCCCCATTTGTATAAAGACGTCGATCTATGGGGCTTGATGAAGGTCAAAAGTGCTTACGAGGGCTCTATGGTGGACCGACCCGATATAGGAAGACTCTCTATCTTCAGATTTGGAACATGGGATCCTAACGAGTTTCCAGTAGACGATCTGATTCGAACAGGGATGGCCATCACTGAAATAGGTATCCGTCAGCCCAAGTTACAGATCATGGGCGGAACAGTTATCGTTGATTTGGAAGGAATAACACTCCGACACGCCGCAACCCTGACTCCGACCATAGCGTATCAGATAGTCTGTTTAATGGGGCTGGTAACACCGACCCGTATTAAAAGCGTTCACATCATAAACTACTCCTGGGTTCTCAACACATTCTTCTACCTCTTCAAGAAGTTCATACCTCAAGAGGCCTGGAGTAAGATTATCTTCCACGGCAGTGACTTGAAATCCCTTCAGCAACAAATCGACCCAGAATGCCTTCCAGCCAGATATGGCGGTACGTGTAGAAATCACGTCCCGATCGGCGTCTGGTTGCAGAAAATCAAAAAATATCGTGACGAACAATTCGATAGAGAAATGAAAGCGCTCGGATACGTCGTCAAAGAGTGA
>DPOGS200022-PA
MYECFLEIAFEAELNTKEDPELLELAPELCNEDASTRATAVTNLRNMIFERAECKPHRTDDAFLLRFLRARDFIVPRAHKLLVRYYTFRAEYPHLYKDVDLWGLMKVKSAYEGSMVDRPDIGRLSIFRFGTWDPNEFPVDDLIRTGMAITEIGIRQPKLQIMGGTVIVDLEGITLRHAATLTPTIAYQIVCLMGLVTPTRIKSVHIINYSWVLNTFFYLFKKFIPQEAWSKIIFHGSDLKSLQQQIDPECLPARYGGTCRNHVPIGVWLQKIKKYRDEQFDREMKALGYVVKE-