| DPOGS200022 | ||
|---|---|---|
| Transcript | DPOGS200022-TA | 882 bp |
| Protein | DPOGS200022-PA | 293 aa |
| Genomic position | DPSCF300337 - 205723-212351 | |
| RNAseq coverage | 952x (Rank: top 13%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003676 | 5e-136 | 75.09% | |
| Bombyx | BGIBMGA012441-TA | 6e-137 | 75.09% | |
| Drosophila | CG10026-PB | 5e-46 | 33.90% | |
| EBI UniRef50 | UniRef50_D6WK77 | 3e-53 | 38.65% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WK77_TRICA |
| NCBI RefSeq | XP_001606243.1 | 6e-60 | 41.79% | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] |
| NCBI nr blastp | gi|345494155 | 9e-59 | 41.79% | PREDICTED: alpha-tocopherol transfer protein-like isoform 1 [Nasonia vitripennis] |
| NCBI nr blastx | gi|345494155 | 7e-58 | 41.37% | PREDICTED: alpha-tocopherol transfer protein-like isoform 1 [Nasonia vitripennis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006810 | 4.1e-15 | transport | |
| GO:0005622 | 4.1e-15 | intracellular | ||
| GO:0005215 | 4.1e-15 | transporter activity | ||
| KEGG pathway | ||||
| InterPro domain | [100-283] IPR001251 | 1.4e-38 | Cellular retinaldehyde-binding/triple function, C-terminal | |
| [22-102] IPR011074 | 1.5e-19 | Phosphatidylinositol transfer protein-like, N-terminal | ||
| [63-85] IPR001071 | 4.1e-15 | Cellular retinaldehyde binding/alpha-tocopherol transport | ||
| [50-85] IPR008273 | 6.8e-10 | Cellular retinaldehyde-binding/triple function, N-terminal | ||
| Orthology group | MCL25968 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200022-TA
ATGTATGAATGCTTCCTTGAGATAGCGTTCGAGGCTGAACTGAATACAAAAGAAGACCCTGAGCTGCTTGAACTAGCACCCGAACTATGCAACGAGGACGCGTCCACCAGGGCCACGGCCGTCACAAATCTCAGGAATATGATTTTCGAAAGAGCAGAATGCAAACCTCATCGGACAGATGACGCGTTCCTCCTGAGGTTTCTCCGAGCGAGAGACTTCATAGTACCGAGAGCGCATAAACTCCTAGTCCGCTATTACACGTTCCGGGCGGAATATCCCCATTTGTATAAAGACGTCGATCTATGGGGCTTGATGAAGGTCAAAAGTGCTTACGAGGGCTCTATGGTGGACCGACCCGATATAGGAAGACTCTCTATCTTCAGATTTGGAACATGGGATCCTAACGAGTTTCCAGTAGACGATCTGATTCGAACAGGGATGGCCATCACTGAAATAGGTATCCGTCAGCCCAAGTTACAGATCATGGGCGGAACAGTTATCGTTGATTTGGAAGGAATAACACTCCGACACGCCGCAACCCTGACTCCGACCATAGCGTATCAGATAGTCTGTTTAATGGGGCTGGTAACACCGACCCGTATTAAAAGCGTTCACATCATAAACTACTCCTGGGTTCTCAACACATTCTTCTACCTCTTCAAGAAGTTCATACCTCAAGAGGCCTGGAGTAAGATTATCTTCCACGGCAGTGACTTGAAATCCCTTCAGCAACAAATCGACCCAGAATGCCTTCCAGCCAGATATGGCGGTACGTGTAGAAATCACGTCCCGATCGGCGTCTGGTTGCAGAAAATCAAAAAATATCGTGACGAACAATTCGATAGAGAAATGAAAGCGCTCGGATACGTCGTCAAAGAGTGA
>DPOGS200022-PA
MYECFLEIAFEAELNTKEDPELLELAPELCNEDASTRATAVTNLRNMIFERAECKPHRTDDAFLLRFLRARDFIVPRAHKLLVRYYTFRAEYPHLYKDVDLWGLMKVKSAYEGSMVDRPDIGRLSIFRFGTWDPNEFPVDDLIRTGMAITEIGIRQPKLQIMGGTVIVDLEGITLRHAATLTPTIAYQIVCLMGLVTPTRIKSVHIINYSWVLNTFFYLFKKFIPQEAWSKIIFHGSDLKSLQQQIDPECLPARYGGTCRNHVPIGVWLQKIKKYRDEQFDREMKALGYVVKE-