Monarch geneset OGS2.0

DPOGS200030
TranscriptDPOGS200030-TA1632 bp
ProteinDPOGS200030-PA543 aa
Genomic positionDPSCF300337 + 42140-50629
RNAseq coverage13x (Rank: top 82%)
Annotation
HeliconiusHMEL0036870.086.94% 
BombyxBGIBMGA012422-TA0.096.99% 
DrosophilanAcRalpha-96Ab-PB0.084.69% 
EBI UniRef50UniRef50_P176440.084.69%Acetylcholine receptor subunit alpha-like 2 n=45 Tax=Neoptera RepID=ACH2_DROME
NCBI RefSeqNP_001103397.10.095.23%nicotinic acetylcholine receptor subunit alpha 2 [Bombyx mori]
NCBI nr blastpgi|41914940.096.32%nicotinic acetylcholine receptor alpha-2 subunit [Heliothis virescens]
NCBI nr blastxgi|41914940.096.32%nicotinic acetylcholine receptor alpha-2 subunit [Heliothis virescens]
Group
Gene OntologyGO:00160216.4e-299integral to membrane
GO:00068116.4e-299ion transport
GO:00160201.6e-83membrane
GO:00068101.6e-83transport
GO:00052301.6e-83extracellular ligand-gated ion channel activity
GO:00048891.8e-23nicotinic acetylcholine-activated cation-selective channel activity
GO:00052161.8e-23ion channel activity
GO:00452111.8e-23postsynaptic membrane
KEGG pathway 
InterPro domain[1-525] IPR0062016.4e-299Neurotransmitter-gated ion-channel
[23-235] IPR0062021.6e-83Neurotransmitter-gated ion-channel ligand-binding
[236-521] IPR0060292.2e-77Neurotransmitter-gated ion-channel transmembrane domain
[56-72] IPR0023941.8e-23Nicotinic acetylcholine receptor
Orthology groupMCL14118 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200030-TA
ATGTCAGCATTTTCAATTTTAATATTATTGACTGTGTGCAGTGTTTGTTATGCTAACCCCGATGCTAAGAGGCTGTATGACGATTTGTTAAGTAATTACAATAGACTTATCAGACCGGTCGATAAAAATAACAATACAGTGCTGGTAAAACTTGGTCTCAGGCTTTCTCAGCTCATTGACCTGAATTTGAAAGATCAAATTCTGACAACCAACGTCTGGCTGGAACATGAATGGGAAGACCACAAATTTAAATGGGACCCTCTGGAGTACGGTGGGGTTAAGGAACTTTATGTTCCTTCAGAGCACATTTGGCTTCCAGATATCGTTTTATATAACAATGCTGACGGAGAGTATGTCGTTACAACAATGACGAAAGCGGTTCTTCATCACACTGGTAAAGTACTTTGGACACCACCAGCCATCTTCAAATCGTCCTGCGAAATAGATGTCCGTTATTTTCCATTCGATCAACAAACTTGTTTTCTTAAATTCGGTTCTTGGAGTTACGATGGAGATCAGATTGATTTGAAACACATTAACCAAAAAAAGGGTGATATGGTGGAGGTGGGCATTGACCTCAGAGAATACTATCCTTCCGTGGAATGGGACATCCTTGGAGTACCAGCTGAAAGGCACGAACGTTATTATCCATGCTGCCAAGAACCTTACCCTGATATTTTCTTCAATATAACTCTAAGAAGGAAAACGTTATTCTACACCGTCAATCTTATAGTACCATGTGTTGGAATATCGTATCTGTCCGTCCTTGTTTTTTATTTGCCAGCTGATTCTGGAGAAAAAATCGCTTTAAGTATATCAATACTTCTCTCTCAAACTATGTTCTTCCTTTTAATATCTGAGATTATTCCATCAACATCCCTCGCCCTGCCTCTACTTGGGAAGTATCTTTTATTCACTATGTTGTTGGTGGGGCTCTCTGTAGTTATAACCATTATAATATTAAACGTTCATTACCGAAAACCTAGCACCCATAAGATGCAACCTTGGGTAAGAAAGTTTTTTATAACGAAGTTGCCAAAGTTACTTTTGATGAGAGTACCGAAGGATTTGCTTAGAGATTTGGCTGCGCAAAAAATAGCTGGGAGAAGCATGAAGAACAAGTTTAAAGATGCTCTAGCTGCAGCTGAACAGAACAATTCTAATGCCTCAAGTCCTGACTCCTTACGCCATCATCTCCCAGGAGGTTGCAATGGACTACATACAACAACCGCTACTAATAGATTTAGTGGTCTTGTTGGCGCGCTCGGTAACCTTGGAGCAGGGTACAATGGCTTGCCGTCTGTTATGTCCGGACTTGACGACTCACTGAGCGATGTGACCCCAAAAAAGAAGTACCCTTTCGAATTGGAGAAAGCCATCCACAACGTTATGTTTATTCAACATCACATGCAACGCCAGGACGAATTCAATGCGGAAGATCAAGACTGGGGTTTTGTTGCTATGGTACTTGATAGATTGTTCCTCTGGATTTTTACCATTGCTTCCATAGTTGGTACATTTGCTATTTTATGTGAAGCACCTTCCTTGTACGATGATACGAAGCCCATAGATATGGTGCTGTCATCTGTGGCGCAGCAACAATTTTTGCCTGTGGACAGCGGGGATTCCTAA

Protein sequence:

>DPOGS200030-PA
MSAFSILILLTVCSVCYANPDAKRLYDDLLSNYNRLIRPVDKNNNTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWEDHKFKWDPLEYGGVKELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAVLHHTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFLKFGSWSYDGDQIDLKHINQKKGDMVEVGIDLREYYPSVEWDILGVPAERHERYYPCCQEPYPDIFFNITLRRKTLFYTVNLIVPCVGISYLSVLVFYLPADSGEKIALSISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNVHYRKPSTHKMQPWVRKFFITKLPKLLLMRVPKDLLRDLAAQKIAGRSMKNKFKDALAAAEQNNSNASSPDSLRHHLPGGCNGLHTTTATNRFSGLVGALGNLGAGYNGLPSVMSGLDDSLSDVTPKKKYPFELEKAIHNVMFIQHHMQRQDEFNAEDQDWGFVAMVLDRLFLWIFTIASIVGTFAILCEAPSLYDDTKPIDMVLSSVAQQQFLPVDSGDS-