| DPOGS200157 | ||
|---|---|---|
| Transcript | DPOGS200157-TA | 600 bp |
| Protein | DPOGS200157-PA | 199 aa |
| Genomic position | DPSCF300128 + 67564-70147 | |
| RNAseq coverage | 423x (Rank: top 29%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL022533 | 2e-92 | 80.30% | |
| Bombyx | BGIBMGA001823-TA | 4e-46 | 69.70% | |
| Drosophila | Rab5-PC | 3e-26 | 43.11% | |
| EBI UniRef50 | UniRef50_E2AP76 | 2e-53 | 54.00% | Ras-related protein Rab-24 n=8 Tax=Endopterygota RepID=E2AP76_CAMFO |
| NCBI RefSeq | XP_625108.1 | 5e-52 | 56.07% | PREDICTED: similar to Ras-related protein Rab-24 [Apis mellifera] |
| NCBI nr blastp | gi|350405457 | 4e-55 | 54.04% | PREDICTED: ras-related protein Rab-24-like isoform 1 [Bombus impatiens] |
| NCBI nr blastx | gi|350405457 | 8e-53 | 54.04% | PREDICTED: ras-related protein Rab-24-like isoform 1 [Bombus impatiens] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 7.4e-40 | small GTPase mediated signal transduction | |
| GO:0005525 | 7.4e-40 | GTP binding | ||
| GO:0015031 | 2.9e-36 | protein transport | ||
| GO:0005622 | 8.5e-10 | intracellular | ||
| GO:0016020 | 5.7e-09 | membrane | ||
| GO:0007165 | 5.7e-09 | signal transduction | ||
| GO:0006184 | 5.7e-09 | GTP catabolic process | ||
| GO:0003924 | 5.7e-09 | GTPase activity | ||
| KEGG pathway | ||||
| InterPro domain | [7-169] IPR001806 | 7.4e-40 | Small GTPase superfamily | |
| [6-172] IPR003579 | 2.9e-36 | Small GTPase superfamily, Rab type | ||
| [5-165] IPR005225 | 1.9e-18 | Small GTP-binding protein domain | ||
| [8-172] IPR003578 | 8.5e-10 | Small GTPase superfamily, Rho type | ||
| [3-172] IPR020849 | 5.7e-09 | Small GTPase superfamily, Ras type | ||
| Orthology group | MCL17973 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200157-TA
ATGAGTAGATGCGACTTCAAAATTGTGTTGCTCGGCAGCGAGCATGTTGGAAAAACGAGCTTGGTGTTGAGATTCGTTAATTGCAGGTTTAATTCTGGCACACCATATCAAAACACAATCGGAGCTGCTTTCTGCGCTAAGACGATGCAATCCAACGGCAAAGATCTCAACATAGGCATATGGGATACGGCCGGTAGCGAACGCTACGAAGCCATGACTCGCATGTACTATAGAGGTGCACATGCGGCAATTATATGCTACGATCCATGCTGTGCGGCGTCCTGGGCTAGACTGAGACATTGGTTGGCTGAATTACGGACTGTGGAAGAGGATTGTAAAGTATATCTCTGCGGTACTAAGAAGGACCTGTTAGATTCAAATTCTACTCGGGAAGTGCCTGAGGATATTGTAGCGACTTACTCTCAAGGGCTCAATGGACATTATTTGACGTCCAGCAAGACGGGAGAAAACGTTGAGGAACTGTTCCAGAAGATTGTTGACGACTGTGTAGCGGATCGCGAACTGATGCGGAAGGTGGAAGAATCGAGGGTTCAGCTAGATAAAGAACAGGAGAAAGATAAGAGGTACTGTCTGTGTTGA
>DPOGS200157-PA
MSRCDFKIVLLGSEHVGKTSLVLRFVNCRFNSGTPYQNTIGAAFCAKTMQSNGKDLNIGIWDTAGSERYEAMTRMYYRGAHAAIICYDPCCAASWARLRHWLAELRTVEEDCKVYLCGTKKDLLDSNSTREVPEDIVATYSQGLNGHYLTSSKTGENVEELFQKIVDDCVADRELMRKVEESRVQLDKEQEKDKRYCLC-