| DPOGS200215 | ||
|---|---|---|
| Transcript | DPOGS200215-TA | 387 bp |
| Protein | DPOGS200215-PA | 128 aa |
| Genomic position | DPSCF300328 + 8884-138416 | |
| RNAseq coverage | 0x (Rank: top 95%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005361 | 3e-35 | 95.65% | |
| Bombyx | BGIBMGA012489-TA | 9e-36 | 95.59% | |
| Drosophila | coro-PB | 2e-22 | 67.69% | |
| EBI UniRef50 | UniRef50_F4WLT3 | 1e-28 | 86.36% | Coronin-2A n=13 Tax=Coelomata RepID=F4WLT3_ACREC |
| NCBI RefSeq | XP_001606043.1 | 1e-30 | 89.23% | PREDICTED: similar to ENSANGP00000029333 [Nasonia vitripennis] |
| NCBI nr blastp | gi|156550141 | 3e-29 | 89.23% | PREDICTED: coronin-2B-like [Nasonia vitripennis] |
| NCBI nr blastx | gi|380011022 | 2e-28 | 92.19% | PREDICTED: LOW QUALITY PROTEIN: coronin-2B-like [Apis florea] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | bta:282196 | 9e-19 | ||
| K13882 (CORO1A) | maps-> | Phagosome | ||
| InterPro domain | [61-126] IPR015505 | 6.5e-39 | Coronin | |
| [64-125] IPR015048 | 3.4e-33 | Domain of unknown function DUF1899 | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200215-TA
ATGTCGCATAATTGCAGAATGCAGCAGCACGGGGAGCACTCACATAATGTTATAGTAGATGTTAAAATGAATGGAGCCATACATCCAGTTTCTAATAAAATTGGAAAGATTATATTCCCCACGACCGATCCTAATCGGCCCAAGACCATGATAATTGAAAAGGCAAGAGCTCTGGAAGTATGGTTCCGTGGAGTTCGTAGCTCGAAGTTTCGTCACGTGTACGGCGTGCCGTTCAAACGTGAGAGATGCTATGATAATATAAAAATAACGAGAAACGCCCACGATTCCAACTTCTGTGCCGTGAACCCCAAGTTTGTGGCTATCGTCACCGAAGTTGCGGGCGGGGGAGCCTTCCTAGTACTGCCTTTGGATCACGTGAGTATATGA
>DPOGS200215-PA
MSHNCRMQQHGEHSHNVIVDVKMNGAIHPVSNKIGKIIFPTTDPNRPKTMIIEKARALEVWFRGVRSSKFRHVYGVPFKRERCYDNIKITRNAHDSNFCAVNPKFVAIVTEVAGGGAFLVLPLDHVSI-