DPOGS200316 | ||
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Transcript | DPOGS200316-TA | 606 bp |
Protein | DPOGS200316-PA | 201 aa |
Genomic position | DPSCF300026 + 38283-40064 | |
RNAseq coverage | 816x (Rank: top 16%) |
Annotation | ||||
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Heliconius | HMEL017470 | 2e-94 | 76.62% |   |
Bombyx | BGIBMGA005612-TA | 2e-73 | 70.00% |   |
Drosophila | glob1-PD | 6e-10 | 25.85% |   |
EBI UniRef50 | UniRef50_B6ZIV8 | 3e-71 | 70.00% | Globin n=3 Tax=Obtectomera RepID=B6ZIV8_BOMMO |
NCBI RefSeq | NP_001136083.1 | 6e-72 | 70.00% | globin 1 [Bombyx mori] |
NCBI nr blastp | gi|215764931 | 2e-73 | 73.53% | globin [Samia cynthia ricini] |
NCBI nr blastx | gi|215764931 | 1e-71 | 73.53% | globin [Samia cynthia ricini] |
Group | ||||
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Gene Ontology | GO:0015671 | 3.5e-36 | oxygen transport | |
GO:0020037 | 3.5e-36 | heme binding | ||
GO:0005506 | 3.5e-36 | iron ion binding | ||
GO:0019825 | 3.5e-36 | oxygen binding | ||
KEGG pathway |   | |||
InterPro domain | [51-195] IPR012292 | 3.5e-36 | Globin | |
[51-196] IPR009050 | 4e-35 | Globin-like | ||
[59-163] IPR000971 | 5.1e-24 | Globin, subset | ||
Orthology group | MCL14709 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200316-TA
ATGCTCTACTACTATCTTTGTTCTACATTTGTCTTGCTGTCAGCTTACGTTGTGTTGAAGAGGGTTAAATTTGGACATAAGATTGAAATGGGTAGTTGGCTGACATACCTCTGGTGGGGTGGAGACCCAGATCTGGTAAATCCTTTATCAGGTCTGACGAAGCGTGAGGTGTACGCCATCCAGCAGTCGTGGGCTCCAGTCTATAGCAACTCTGTAGCCAATGGAACTGAACTCCTCAAACGGTTATTCCGAGCATACCCAGAAACTAAGGAGTTTTTCAAAATGGTGAGGAAATCTTCTGAAGACGAATTCATAGGAAATCCACAATTCAGAGCGCACGTGATAAATTTAATGAGTTCATTGAACCTGGCTGTTGGCAATCTCAATCAGCCCGAAGTCGTTTCGGCCATGATGAACAAACTGGGAGAGTCACATGGCAGAAGAAAAATACAGGAAAAACACTTTCATGACTTGAAGGACGTTATAGTCAAAATGTTTATAGAAGTATTGAAACTGGATGGCACTACACTGAATGCGTGGGGAAAAGCTGTTGATTTCTGGTACAAACACATCTTCGAAACGTTGAAACAAGCCGAGATAAGATAA
>DPOGS200316-PA
MLYYYLCSTFVLLSAYVVLKRVKFGHKIEMGSWLTYLWWGGDPDLVNPLSGLTKREVYAIQQSWAPVYSNSVANGTELLKRLFRAYPETKEFFKMVRKSSEDEFIGNPQFRAHVINLMSSLNLAVGNLNQPEVVSAMMNKLGESHGRRKIQEKHFHDLKDVIVKMFIEVLKLDGTTLNAWGKAVDFWYKHIFETLKQAEIR-