Monarch geneset OGS2.0

DPOGS200382
TranscriptDPOGS200382-TA2379 bp
ProteinDPOGS200382-PA792 aa
Genomic positionDPSCF300026 + 1134883-1137417
RNAseq coverage175x (Rank: top 50%)
Annotation
HeliconiusHMEL0053880.070.58% 
BombyxBGIBMGA007239-TA5e-11279.09% 
DrosophilaCG1671-PA2e-13934.72% 
EBI UniRef50UniRef50_E3WSL60.049.24%Putative uncharacterized protein n=2 Tax=Culicidae RepID=E3WSL6_ANODA
NCBI RefSeqXP_001601796.10.050.51%PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis]
NCBI nr blastpgi|1565429430.050.51%PREDICTED: transducin beta-like protein 3-like [Nasonia vitripennis]
NCBI nr blastxgi|1571064620.050.50%hypothetical protein AaeL_AAEL004526 [Aedes aegypti]
Group
Gene OntologyGO:00055151.4e-57protein binding
GO:00320406.8e-32small-subunit processome
GO:00063646.8e-32rRNA processing
KEGG pathway 
InterPro domain[385-630] IPR0159431.4e-57WD40/YVTN repeat-like-containing domain
[299-628] IPR0110461.3e-55WD40 repeat-like-containing domain
[654-786] IPR0139346.8e-32Small-subunit processome, Utp13
[513-549] IPR0197812.6e-09WD40 repeat, subgroup
[510-549] IPR0016802.8e-08WD40 repeat
[122-136] IPR0204721.6e-06G-protein beta WD-40 repeat
Orthology groupMCL12321 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200382-TA
ATGGCAAATCTTAAAGAATTGTATGAGAAGACAGCAGAATTAAAAGCATTTTACACAGGAGGACATATTCAATGGACCAATGATGGTGAACATTTTCTCTGCCAATGTGATGATGTTATTAAAGTTATTGATGTCAACACACTCAGTAATCCATTGACTATTGGAGATGCTACTGAGGATAAAGATGACAGTGACGTCATTTACACCTTCCAAATGTCGAAGGATAATGAGACTGTAGTTACAGCACATAAAAGTGGATTAATTAAAATATGGGATAGAAAAGAAGGGAGCCAGCTAAAAATGTGGAGATCTGGACATAAAGGTGCCATTGCAAAGTTAGCCTTTGATGCAAATGGAACAAATGTTGCTTCAGGCAGCACGGACGGAAATATAAAATTATGGGACATCACTCATAACACTTGTACGAGCAGCTTGAGGGGAGCTCTGGGAGTGTTTTCACTTGTCAAGTATCATTCGGATGATTCAAAACAGCTAATATTTGGTGCTGCAGATGACACTAAGATAAGATCCTGGAATTCTAAATCTGGTAAAGAGAGTGTTATATATTCAGGACATTTTAGTAAGGTCACAAGCTTAGAATTTACACCAGATGGTGACCATATGGTGAGTTCGGGAAGAGACAGAGTTCTTATACTGTGGAAACTTGGTGAAGGCAAAGCACTCAAAGTTCTACCAGTGTATGAATGTATAGAAACACTTGCACTTCTGCCACCAAGTTTCAAAATTCCCAACTTTACTAAGAAAGTTGGCACAGAAGGTATATATGTTGCTTGTGCTGGTGAGAAAGGTATTGTTAAGGTTTGGAATGTACAAATGAGTCGTCTAATGTTTGAACAGACAAACAGTCTTGTATCACCAGCCAATGAAGACGGGGGTTTAGCGGTCACCCATTTGTTATTCAATGAAGCAAGGAATATGTTCTCCGTAGTCACCGCTGACCATAACATTATTATACATGACTTAGAGTCTTTTGGCTGTGTTAAACAATTAATTGGTTTCACGGATGAAGTATTGGATATTATTTTTGTTGGTAAAGATGAGTCGCATATAGTTGTTGCTACAAACAGTAAAGATTTAAAGTATTATGAGCTAGGAAGCATGGACTGTAAATTATTAAAGGGTCATACAGATATTGTTCTTGCGTTGTCATGTTTTCCAACAAGGCCGGATTTATTTGTGTCCTCTGGTAAGGACAATACTGTCAGAATTTGGTTACAAATTGATTACAATGAAGTCAAGTGTATTGGTGTTGGCACAAGACATACTGCATCAGTGGGTTCTGTTTTCGCTTCTCAAACATCAGCGAATTTCTTTGCCTCTGTAAGCCAGGATAGCTGTTTAAAAATTTGGACTATACCTAAAGATTTTGACTCTACGGAAACAAAACTTAACTCAAGTCATACAGAATTAGCTCATAATATGGATATTAACTGTGTCTCCATATCTCCAAATGATAAAATAATAGCAACCGGTTCACAAGACAAAACGGCGAAGCTTTGGAGCGATGATTTATCATTGTTGGGTGTGCTGAAAGGGCACAGGAGAGGTATATGGTGCGTCAGGTTTTCTCCAGTCGATCAAGTAGTGCTGACGTCATCAGCAGACGCTACATTGAAATTATGGTCCATAGCAGATCTTAGTTGTCTCAAGACATTCGAAGGTCACGAAAGTTCAGTCTTGAAAGTAGATTTCCTTAGCAAAGGACAACAAATAATATCGAGTGGAGCGGACGGTCTTTTAAAACTTTGGACAATAAAGACATCGGAATGCAAAATGTCTTTAGATAATCACGAAGGTAAAGTGTGGTCCATGACAGTTAGCAAGAATGAATCGATCATAATAACAGGTGGCTCGGATTCTAAGCTAGTGACTTTGAAAGAGGTGTCCGTTGAGAGGCGAGAAAAGTTAGCAAGAGAACGAGAGGAACTCATTCTACAAGAACAGGAGCTCATGAATTTATTGCACGACAAGAAATTAATAAAAGCCCTTAAATTAGCGTTGCGAATGGAGAGACCTAAGAATGTTCTAAAAATAATCAACGAAATTTTAAAATCCGGTCATGAAAAACTCTCTGAGACCCTCAAAGAAATTAATAACACACAGAAAGAAACTCTACTCAGATTCGCTGCCGAATGGAACACTAATAATAAGAATGCTCACGCAGCGCAGTACGTATTTTACATCTTAACACCAGAAATAATATCTGGTAGCCTCAAGGTGTCGTCGTTAGGAAGTTTCATAGAAGGCGCGCTGCCGTACACCGAGCGTCACTTTGAAAGATTAACGAACTTACTCCAGGACCTTAATTTCGTTACGTACACTGTAAATTGTATGCAACCACATTCTGTTAAAAAATAA

Protein sequence:

>DPOGS200382-PA
MANLKELYEKTAELKAFYTGGHIQWTNDGEHFLCQCDDVIKVIDVNTLSNPLTIGDATEDKDDSDVIYTFQMSKDNETVVTAHKSGLIKIWDRKEGSQLKMWRSGHKGAIAKLAFDANGTNVASGSTDGNIKLWDITHNTCTSSLRGALGVFSLVKYHSDDSKQLIFGAADDTKIRSWNSKSGKESVIYSGHFSKVTSLEFTPDGDHMVSSGRDRVLILWKLGEGKALKVLPVYECIETLALLPPSFKIPNFTKKVGTEGIYVACAGEKGIVKVWNVQMSRLMFEQTNSLVSPANEDGGLAVTHLLFNEARNMFSVVTADHNIIIHDLESFGCVKQLIGFTDEVLDIIFVGKDESHIVVATNSKDLKYYELGSMDCKLLKGHTDIVLALSCFPTRPDLFVSSGKDNTVRIWLQIDYNEVKCIGVGTRHTASVGSVFASQTSANFFASVSQDSCLKIWTIPKDFDSTETKLNSSHTELAHNMDINCVSISPNDKIIATGSQDKTAKLWSDDLSLLGVLKGHRRGIWCVRFSPVDQVVLTSSADATLKLWSIADLSCLKTFEGHESSVLKVDFLSKGQQIISSGADGLLKLWTIKTSECKMSLDNHEGKVWSMTVSKNESIIITGGSDSKLVTLKEVSVERREKLAREREELILQEQELMNLLHDKKLIKALKLALRMERPKNVLKIINEILKSGHEKLSETLKEINNTQKETLLRFAAEWNTNNKNAHAAQYVFYILTPEIISGSLKVSSLGSFIEGALPYTERHFERLTNLLQDLNFVTYTVNCMQPHSVKK-