| DPOGS200429 | ||
|---|---|---|
| Transcript | DPOGS200429-TA | 510 bp |
| Protein | DPOGS200429-PA | 169 aa |
| Genomic position | DPSCF300236 - 23459-33011 | |
| RNAseq coverage | 420x (Rank: top 29%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012256 | 3e-37 | 87.62% | |
| Bombyx | BGIBMGA009002-TA | 2e-34 | 78.95% | |
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_H0XLP5 | 4e-24 | 55.67% | Uncharacterized protein n=13 Tax=Amniota RepID=H0XLP5_OTOGA |
| NCBI RefSeq | XP_972543.2 | 2e-38 | 71.68% | PREDICTED: similar to split ends CG18497-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|189240095 | 3e-37 | 71.68% | PREDICTED: similar to split ends CG18497-PA [Tribolium castaneum] |
| NCBI nr blastx | gi|189240095 | 5e-35 | 71.43% | PREDICTED: similar to split ends CG18497-PA [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0000166 | 2.7e-11 | nucleotide binding | |
| GO:0003676 | 1.9e-07 | nucleic acid binding | ||
| KEGG pathway | ||||
| InterPro domain | [3-85] IPR012677 | 2.7e-11 | Nucleotide-binding, alpha-beta plait | |
| [7-86] IPR000504 | 1.9e-07 | RNA recognition motif domain | ||
| Orthology group | MCL22199 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200429-TA
ATGGTTAGAGAGACTCGGCACCTGTGGGTTGGAAATTTACCCGATAACATACGTGAAGACCGAATAAGAGAGCATTTTAAACGCTATGGCCGAGTCCAGAATGTCAAGTTATTGGGTCGAATGGAAAACGCAAGCGCGAACACAAACGCGGTTGCTAATAGCGGTGTGTGTGCCACTGTTGCCTTTATGGACATCAAGTCTGCTTCGAAGGCACATAACGTGGAGCACGTACTGGACGAACGAACTCTCACCACTGAGTATTACGAGCCAGCCGCAATACCATCGTCCGCGGGCGCGCCTTCTGCCGGGTCTTCACCTGCCGGCTCCGGCTACTCAGGTTCTTCATCCTCCGTGAATTCAGCACCCGTTCCCGTTACAACCTCGCGTTATCATCTTTCTCCTCGCACACGTATGGATTCCGCCGCCGCCAAGACAGTGAAATTGCGGTCATCACTCATGGATTGCAGTGTTATACTTGGATTGCAGTGGGGAAATCACCCGATAAAGTGA
>DPOGS200429-PA
MVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRMENASANTNAVANSGVCATVAFMDIKSASKAHNVEHVLDERTLTTEYYEPAAIPSSAGAPSAGSSPAGSGYSGSSSSVNSAPVPVTTSRYHLSPRTRMDSAAAKTVKLRSSLMDCSVILGLQWGNHPIK-