DPOGS200519 | ||
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Transcript | DPOGS200519-TA | 432 bp |
Protein | DPOGS200519-PA | 143 aa |
Genomic position | DPSCF300676 - 7279-9340 | |
RNAseq coverage | 549x (Rank: top 23%) |
Annotation | ||||
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Heliconius | HMEL011922 | 1e-25 | 79.37% |   |
Bombyx | BGIBMGA005387-TA | 1e-46 | 89.58% |   |
Drosophila | cenB1A-PA | 6e-21 | 50.51% |   |
EBI UniRef50 | UniRef50_F4WSP8 | 6e-29 | 61.86% | Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 n=6 Tax=Formicidae RepID=F4WSP8_ACREC |
NCBI RefSeq | XP_392754.2 | 2e-29 | 61.86% | PREDICTED: similar to centaurin beta 1A CG6742-PA, isoform A [Apis mellifera] |
NCBI nr blastp | gi|383857513 | 2e-28 | 61.86% | PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like [Megachile rotundata] |
NCBI nr blastx | gi|383857513 | 9e-28 | 61.86% | PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like [Megachile rotundata] |
Group | ||||
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KEGG pathway | ame:409230 | 5e-29 |   | |
  | K12489 (ACAP) | maps-> | Endocytosis | |
InterPro domain | [3-79] IPR020683 | 5.3e-20 | Ankyrin repeat-containing domain | |
Orthology group | MCL30335 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200519-TA
ATGGCGTGTTCGTTCCTACTTTTGAACGGTAGCAAGCTGAATTGTCAGGACGAGGACGGTATGACGCCGCTACACCTCGCTACCGAGGCGGGACACACCGGGCAGGTGTGTCTCCTACTGCGCTACAAGGCCGACCAGTCGCTGTGCGACAAAGAGGGTCGGACTCCGCTGGACATGGCTGTGTCGCACGCCAACGCGGATATCGTCACGCTTCTCCGTCTGACGAAGCTGAACGAGGAGATGCGCGAGAGTGAGATGGCTTCCAACGACGACACGTACAACGAGGTGAACAAACCAGTGAATGACGAAGGCACAGAAAGTTTTGGCGACTACAGCTGTGGTGGCGAGACCAGTGATGCGGTGATTAGTGATGTGCCGAGTACAAGGTGTACTATGTCGACGGATTATCCACCTTATATTCTAGATGCATAG
>DPOGS200519-PA
MACSFLLLNGSKLNCQDEDGMTPLHLATEAGHTGQVCLLLRYKADQSLCDKEGRTPLDMAVSHANADIVTLLRLTKLNEEMRESEMASNDDTYNEVNKPVNDEGTESFGDYSCGGETSDAVISDVPSTRCTMSTDYPPYILDA-