| DPOGS200647 | ||
|---|---|---|
| Transcript | DPOGS200647-TA | 537 bp |
| Protein | DPOGS200647-PA | 178 aa |
| Genomic position | DPSCF300076 + 670165-677954 | |
| RNAseq coverage | 18x (Rank: top 80%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL001034 | 1e-19 | 43.75% | |
| Bombyx | BGIBMGA011323-TA | 2e-22 | 47.92% | |
| Drosophila | CG12859-PA | 4e-11 | 33.71% | |
| EBI UniRef50 | UniRef50_C3PPG4 | 1e-17 | 43.75% | Similar to CG12859 n=2 Tax=Nymphalidae RepID=C3PPG4_9NEOP |
| NCBI RefSeq | XP_002435491.1 | 2e-13 | 40.86% | protein XAP-5, putative [Ixodes scapularis] |
| NCBI nr blastp | gi|229487387 | 4e-17 | 43.75% | unnamed protein product [Heliconius melpomene] |
| NCBI nr blastx | gi|229487390 | 6e-37 | 98.67% | unnamed protein product [Heliconius melpomene] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | isc:IscW_ISCW018878 | 6e-13 | ||
| K03960 (NDUFB4) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200647-TA
ATGACCCAAATTGAGAGAAGGGCAAAATATAGACAGGAATTCCTGAAGCTTAGGACCGATCCATGTCTACACTCTAAGGAGTCGGGATTTGTTTTTGACGAAGCTCTACAGAGATGGCTGTCAATGAAAGCTTGTCAGGTCGAATATTTCCAAGCCACCCCCAGAAATGCTATCAAAGGTGCTGTCATGATAATCATGCCTATGTTGATTTACGGATATTTTCTGCGGAAGCAGAGAACAAAATTCTTGCAGGATTGCCGTTGTGGCAAGATCCGTTACAGAGATAGACTACACGATGGACGCGATGTATTGCAAACATCCTGGCCTCCTCACAGGATACTTCTCTCCTTGCACCATTCTTATTATCAGATCCAACAAGGTCAACTTTACATCCAACCAATGCAAACACTGGTCGGTGTGGTTCTATATGCCTCTTCGCTTCCATCATCCATAAAGGTATGTGTTCAAAACTGGATCGATTACACACGTCGTAAACTAAAAGAGCACCAACTGAGTTCCTGTAATAGGATTTCGTGA
>DPOGS200647-PA
MTQIERRAKYRQEFLKLRTDPCLHSKESGFVFDEALQRWLSMKACQVEYFQATPRNAIKGAVMIIMPMLIYGYFLRKQRTKFLQDCRCGKIRYRDRLHDGRDVLQTSWPPHRILLSLHHSYYQIQQGQLYIQPMQTLVGVVLYASSLPSSIKVCVQNWIDYTRRKLKEHQLSSCNRIS-