Monarch geneset OGS2.0

DPOGS200714
TranscriptDPOGS200714-TA4290 bp
ProteinDPOGS200714-PA1429 aa
Genomic positionDPSCF300030 - 278320-288541
RNAseq coverage322x (Rank: top 35%)
Annotation
HeliconiusHMEL0100930.075.34% 
BombyxBGIBMGA001048-TA0.068.51% 
Drosophilaarr-PA0.042.19% 
EBI UniRef50UniRef50_E2B7S90.042.85%Low-density lipoprotein receptor-related protein 6 n=8 Tax=Formicidae RepID=E2B7S9_HARSA
NCBI RefSeqXP_001603043.10.041.72%PREDICTED: similar to CG5912-PA [Nasonia vitripennis]
NCBI nr blastpgi|3838579880.043.12%PREDICTED: low-density lipoprotein receptor-related protein 6 [Megachile rotundata]
NCBI nr blastxgi|3838579880.042.90%PREDICTED: low-density lipoprotein receptor-related protein 6 [Megachile rotundata]
Group
Gene OntologyGO:00055153.4e-11protein binding
KEGG pathwaynvi:1001192320.0 
 K03068 (LRP5_6)maps-> Wnt signaling pathway
InterPro domain[259-520] IPR0110426.3e-85Six-bladed beta-propeller, TolB-like
[411-453] IPR0000334.3e-14LDLR class B repeat
[1156-1201] IPR0021723.4e-11Low-density lipoprotein (LDL) receptor class A repeat
Orthology groupMCL10050 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200714-TA
ATGGAATACAACGACACCCATTCAGGAGAGAAGATAAGAATAGTTTCAGAAGGTATAATTACTCCTACTGGTATTGCATTAGATTGGTACACTAATAAAATGTACTGGACGGACGGTGAAACTAATAAAATTGAAGTGATTTGTATTGAAAATAAATATAGGAAAGTACTATTTTGGTCAGATGTCGACCTTGCAAGAGCTATTGCTCTCGTTCCAACAGAAGGGCTTATGTTCTGGACCGATTGGGGAGAAATACCTAAAATAGAAAGGGCTGGTATGAACGGTGATCCGGCCACAAGGAAAGTTATAGTGAAGGATAATATATTTTGGCCGAATGGAATCACAGTGGATTATAACAACAATTTAATATACTGGGTTGACACTAAGTTACAATTTGTTGATGTGATGGGTTTCAATGGTGAGAATCGGAAACGGGTCGTTAAAGATGGCTTGAAGCATCCTTATGCTTTGGCTTATTTTGATAATAAACTTTATTGGACCGATTGGAAGAAATGGTCCATATATACGTATGACATAGCTGCAAATAGTTCTCTGAAAGAAATTATAAAATCCGACCATGTGCCGGTAGACATCAAGGTGTACGATGAAAGTCGGCAAGTTATACCCAATGGAGAGTACCCTTGTAAAAACAATGAGAAATGTTCACATCTGTGCCTTCTAGCTCCTAATTCGCCTGGCTATGTGTGCAGCTGTCCAACCGGCGTAAAGTTAAGGGAAGGCAGCAACACAACCTGCTACAATGGACCGCAGTCATTGCTGTTGGTGGCTCAGAGATCGATCATATCAAAAATATCCCTCGACTCACCGGACTACACGCCTTACTCGTTACCATTGAAAGATCTTAAGAGAGCTCTTACAGTTGATTTTGATCCCAAAACTGAATATATATATTGGGCTGACAGCATGTCCAAGACAATATCTCGAGCTCGTCTGGATGGCAGCGACCAATCAATAGTGATCCATTGTAGCGGTGTACCGGACAGTATAGCCATAGATCCGCTAGCTAGGAATATTTACTGGACTGATCCTATATCTGACACTATAACTGTGGCCAGGCTGGATGGACAAGCTAGAAAAGTTATAATTCACGACGAGCTTTACGATCCTCGCGCGATCGCCCTACATCCGGTGGCCGGGTGGATGTTCTGGTCCGATTGGAACGAGAAGAAACCTAAAATAGAACGAGCCAACCTCGACGGCACAGGACGGGTGTTGCTAGTCTCCGAAAAACTGATTTGGCCAAATGGCATCGCTCTGGATACGGAAAAAAATAAACTGTACTGGGGTGACGCGAGAACACATAAAATAGAGGTCTGTAATATGGACGGGTCCGGAAGGCGTGAGCTTCATGGGAGTGACATTCTTCATATATTTGGACTCACCCTTCTGGGTGATAATCTGTACTGGACTGATATGCAGCGACGCACATTGGATAGGATCAACAAGGAAACTGGGTCGTCACGTCAGTCGGTGGTGGAGCAAATGGCGAACATGATGGGTGTGCGTGCCGTCCGTTTGGGTCCGCTGGCCAGCCGGAACCCATGCTCGGCTGAACACGTCTGCTCACACCTGTGCTTCAACCGACCCGACACACACGTGTGCGCCTGCCCTATCGGTCTGGAGCTCGGAAGCGACAGGAAGACTTGCATAGAACCGGAAGCCTTCCTCTTGTACAGCAGGAAGAACATCATCGGACTTATAAGTATCGACAATGAGAACAACGACGCGGTGCTGCCTATAAAGGAGCTGAAGGAAGTCAGTGCCCTAGCAGTAGACGTGTCCGGTTCCAAGTTATACTGGTCGGACAGCAAAACAAAAACAATAAATCGATGTAATATAAACGGATCCAATATGGAGAAGATACTAGAGTTCATGGGTCTTGTTGAAGGTGTCGCGATAGACTGGTCGGCTCAGAACATCTACTGGACGGACACGGCGGCGCATCGCATCGAAGTGGCCAGACTAGACGGGTCCAGCAGACGGGCGATCATGTGGCAGGGGCTGAAGAAACCTAAGAGCATCGCACTCGATCCGCGGAAGGGCTACATGTACTGGTCGGAGCTGGGATCCAAGACTATCAAACGGGCCACAATGGACGGGTCTTCCCCCATAGTTCTATTCGAGCAGGTTGTTAAAGTCCACGCGCTGGCCATAGACTTCGAGAAGAGAGCCATCTACTGGGCGGCACTGGACTCTATGGTCATTGAATACGCATTCCTGAACGGAACCGGGAGGAAGGTGCTAGTCGATAACATACCCATGCCGTACGCGCTGGCTCTGTACAACGATCGGGTGTTTTGGGGAGACTGGAATACAGGTCTCGTGGAGGTCGCGAGGAAATCGGACGGATCAAGTCGTAGGACCATTCATACACAGTTGGATTATATATCAGATTTGAAGGTTTACCACAGGGGCAGGGACAACCTGTCCAACCAATGCGGGGTGGACAACGGGGGCTGCTCGCATTTATGCTTACCTTTGACGAACAACGACTACAGATGCGCTTGTCCGACGCATTACAGGCTCAACAGAGACAATCTCACGTGTTCCGAGCCTGAAGAGTTCTTGTTGTACGCTCAGAAGAACGCCGTGGGTCGGCTACTAGCTGCCAACAGCGAGTGTAGTGACGCCTTCATCCCTCTGACGGGGCTCCGGAACGTGAAAGCGATCGAGTACGACCCGATCAGCAGACATCTCTATTGGATGGACGAAGAAAATCACTCCATACGAAGAGTTCCCATATCTTATTCTGCGACATCAGCAGTCACGGACTCTACAAACGTCGTGTCCGATCTATCGAGACCCTTCCACATGGCGTTGGACGTGCTAGGAAGGACTCTGTACTGGACATGTCTCAACACAGACTCCATCAACGCCACCTCCATAGAAAACAACTCGTCATCCGGCGTCATAATACGAGGAGACAATATGATGCCCAGATATTTAGCGTTCCATCAAACGAAAAGGTTGCTGTTCTGGAGCGACGCTGGTCTGGGCGGTATATTTCGGTCGTTGGTGGACGGGTCGGAGCGCGCACAGTTGGTTCGTGTGGACAACGTGACCGCCCTCGCTCTGGACATGGGCGGTGCATCCGCCCTGTACTGGGCTGTGGGAAGACAGATACACGCCGTGGACATTGATGGCTCCAACAGGTATACGAGTCATCTGGCAGGGCGGGGCTGTGGGTGCTCTGGCTGCGTACGGCGGCGCGCTATACCTCGGCGGCGAGCGTGTCCCGAGCCGGCGAGCGTGTCCGAGCGGCTGCCGTTACACCGGCGCGACGCGCCCGCGACGCCGCTCGCCCACGTGCAGCGGATACTGTCCGCGGTCAGTGTACACCGCGTCCCACGCGACCACCCCTGCTATGGAGCGTGCGGCGGAGCCCCGGCCACTTGCGGCAGGGACGGGGTCTGCGGCTGCGGCCTGAGCTGCTCCGCCCGGAGACACTGTGACCCTGATCACTTCCTGTGCGGTCGAGACAACGGACCCACCACTAATAGCGTACAGTGTATACCCATGGAGTGGAAGTGTGACGGTCAACGCGACTGTCTCGACGGGTCGGATGAATCTCAGTGTGACAGCTGTGCGGGGCTCCACTGCGCGGACGGGTCCTGCGCCCCCGCACTTGGCGGCTGTCTCACGGGCGCGTACTGCACACACGCACTACCAGACGCCTTCCGTTGTGACGACCGTCTTTGTCTGCCGGCCGGTCTACTGTGCGACGGCCGCTCTCACTGTGAGGACGAATCAGACGAAGCCCCCGCCGCGTGTGGATACGTTCACAAAGATCAGATGGTGTCGGTGGGTGCGAGTGGTCAGTCGCACGCGTTAGTAGTGTGCGGATCGGTGGTAGGGGCGGCGGTGGTGGTGGCCGCCCTGTGGGCGGGCGTCAGGCGGTACTCCAGGGCGGGGCGACACCAGCCTCACCAGAGAACACTCGCACTCAACAAGCCAGCCACCCGACCCAGGACAGATGCGCCGTCATCCGAATTGAGCGCGATGGGCACTGCTTCGGGATGCGGATCCGGCTCGGGCTCGGGCTCGGGCTCGGGCTGGGGCTCGGACAGTCTTTGCGGACGATACCCGCGACCTACCGCCAACCCTCCGCCCAGTCCGGCCACGGCCTCAGGAGGGAGACGACGCGCCTACAGGAACTATAGGGCTTCGAATAGGCCTCCGCCACCAACACCGGCCTCCACTGACGCGAACGAATCAGAGAACGAACACGCGAGGGCGCCACCACCCTCGCCGGCGCCCTTGCTTTACTAG

Protein sequence:

>DPOGS200714-PA
MEYNDTHSGEKIRIVSEGIITPTGIALDWYTNKMYWTDGETNKIEVICIENKYRKVLFWSDVDLARAIALVPTEGLMFWTDWGEIPKIERAGMNGDPATRKVIVKDNIFWPNGITVDYNNNLIYWVDTKLQFVDVMGFNGENRKRVVKDGLKHPYALAYFDNKLYWTDWKKWSIYTYDIAANSSLKEIIKSDHVPVDIKVYDESRQVIPNGEYPCKNNEKCSHLCLLAPNSPGYVCSCPTGVKLREGSNTTCYNGPQSLLLVAQRSIISKISLDSPDYTPYSLPLKDLKRALTVDFDPKTEYIYWADSMSKTISRARLDGSDQSIVIHCSGVPDSIAIDPLARNIYWTDPISDTITVARLDGQARKVIIHDELYDPRAIALHPVAGWMFWSDWNEKKPKIERANLDGTGRVLLVSEKLIWPNGIALDTEKNKLYWGDARTHKIEVCNMDGSGRRELHGSDILHIFGLTLLGDNLYWTDMQRRTLDRINKETGSSRQSVVEQMANMMGVRAVRLGPLASRNPCSAEHVCSHLCFNRPDTHVCACPIGLELGSDRKTCIEPEAFLLYSRKNIIGLISIDNENNDAVLPIKELKEVSALAVDVSGSKLYWSDSKTKTINRCNINGSNMEKILEFMGLVEGVAIDWSAQNIYWTDTAAHRIEVARLDGSSRRAIMWQGLKKPKSIALDPRKGYMYWSELGSKTIKRATMDGSSPIVLFEQVVKVHALAIDFEKRAIYWAALDSMVIEYAFLNGTGRKVLVDNIPMPYALALYNDRVFWGDWNTGLVEVARKSDGSSRRTIHTQLDYISDLKVYHRGRDNLSNQCGVDNGGCSHLCLPLTNNDYRCACPTHYRLNRDNLTCSEPEEFLLYAQKNAVGRLLAANSECSDAFIPLTGLRNVKAIEYDPISRHLYWMDEENHSIRRVPISYSATSAVTDSTNVVSDLSRPFHMALDVLGRTLYWTCLNTDSINATSIENNSSSGVIIRGDNMMPRYLAFHQTKRLLFWSDAGLGGIFRSLVDGSERAQLVRVDNVTALALDMGGASALYWAVGRQIHAVDIDGSNRYTSHLAGRGCGCSGCVRRRAIPRRRACPEPASVSERLPLHRRDAPATPLAHVQRILSAVSVHRVPRDHPCYGACGGAPATCGRDGVCGCGLSCSARRHCDPDHFLCGRDNGPTTNSVQCIPMEWKCDGQRDCLDGSDESQCDSCAGLHCADGSCAPALGGCLTGAYCTHALPDAFRCDDRLCLPAGLLCDGRSHCEDESDEAPAACGYVHKDQMVSVGASGQSHALVVCGSVVGAAVVVAALWAGVRRYSRAGRHQPHQRTLALNKPATRPRTDAPSSELSAMGTASGCGSGSGSGSGSGWGSDSLCGRYPRPTANPPPSPATASGGRRRAYRNYRASNRPPPPTPASTDANESENEHARAPPPSPAPLLY-