| DPOGS200766 | ||
|---|---|---|
| Transcript | DPOGS200766-TA | 447 bp |
| Protein | DPOGS200766-PA | 148 aa |
| Genomic position | DPSCF300318 - 59899-60345 | |
| RNAseq coverage | 146x (Rank: top 54%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | % | |||
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_B7S8P8 | 3e-22 | 39.58% | Retroelement polyprotein n=15 Tax=Endopterygota RepID=B7S8P8_9HYME |
| NCBI RefSeq | XP_001808421.1 | 8e-17 | 30.82% | PREDICTED: similar to orf [Tribolium castaneum] |
| NCBI nr blastp | gi|190702380 | 1e-21 | 39.58% | retroelement polyprotein [Glyptapanteles flavicoxis] |
| NCBI nr blastx | gi|190702380 | 3e-20 | 39.58% | retroelement polyprotein [Glyptapanteles flavicoxis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 1.2e-18 | nucleic acid binding | |
| GO:0015074 | 3.8e-15 | DNA integration | ||
| GO:0003677 | 3.8e-15 | DNA binding | ||
| KEGG pathway | spu:578716 | 2e-07 | ||
| K03364 (CDH1) | maps-> | Ubiquitin mediated proteolysis | ||
| Cell cycle - yeast | ||||
| Progesterone-mediated oocyte maturation | ||||
| Cell cycle | ||||
| InterPro domain | [3-135] IPR012337 | 1.2e-18 | Ribonuclease H-like | |
| [9-118] IPR001584 | 3.8e-15 | Integrase, catalytic core | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200766-TA
ATGTATCCTATTGAGAAGAAATCTATCCCATTTGATACGATTCACATGGATGCGACGGGGCGCCTCGCTAAGAAGCGTGATAGGGGTGAATGTGTGGTCGTGGTAATCGATGCTTATACAAGATATGTAACCTTGACTTGCGCAACTAATAAGACAGCAACCGGGGTGCTTCGTGCACTGGAGTGCGTGGTTTCGTTGTTTGGGACGCCTGGACAAATAATTGGTGATCAAGATGCAGCTTTTGAAGTCGAATTTGAATTTTGTGAATTTCGTGGTATTTGTCAACATTGCACGGCTCCTGGCGTGGGTCGCAGTAATGGACAGATTGAACGTGTAATGGCGGTAGTCAGGGATGGGTTGGCGATTATACGAAGCTGCGGAACTAAGGATTGGAAGAGGGGTTTGGGTTCTCTCGAGCTAGCAATTGCTAGCGGTTGGTTGCACTAG
>DPOGS200766-PA
MYPIEKKSIPFDTIHMDATGRLAKKRDRGECVVVVIDAYTRYVTLTCATNKTATGVLRALECVVSLFGTPGQIIGDQDAAFEVEFEFCEFRGICQHCTAPGVGRSNGQIERVMAVVRDGLAIIRSCGTKDWKRGLGSLELAIASGWLH-