DPOGS200786 | ||
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Transcript | DPOGS200786-TA | 783 bp |
Protein | DPOGS200786-PA | 260 aa |
Genomic position | DPSCF300370 + 35228-42266 | |
RNAseq coverage | 41x (Rank: top 72%) |
Annotation | ||||
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Heliconius | HMEL004928 | 2e-44 | 46.75% |   |
Bombyx | BGIBMGA012003-TA | 4e-97 | 70.89% |   |
Drosophila | Hand-PA | 4e-28 | 46.84% |   |
EBI UniRef50 | UniRef50_D6W7D0 | 1e-31 | 49.39% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6W7D0_TRICA |
NCBI RefSeq | XP_972310.1 | 2e-32 | 49.39% | PREDICTED: similar to heart and neural crest derivatives expressed transcript 2 [Tribolium castaneum] |
NCBI nr blastp | gi|91076044 | 3e-31 | 49.39% | PREDICTED: similar to heart and neural crest derivatives expressed transcript 2 [Tribolium castaneum] |
NCBI nr blastx | gi|242005999 | 1e-27 | 47.75% | dhand, putative [Pediculus humanus corporis] |
Group | ||||
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Gene Ontology | GO:0006355 | 1.6e-12 | regulation of transcription, DNA-dependent | |
GO:0005634 | 7e-12 | nucleus | ||
KEGG pathway |   | |||
InterPro domain | [123-206] IPR001092 | 1.6e-12 | Helix-loop-helix DNA-binding domain | |
[158-205] IPR011598 | 7e-12 | Helix-loop-helix DNA-binding | ||
Orthology group | MCL21009 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200786-TA
ATGTCTAGTTATGGCAGCACCTCTCCTTCTGACGAGGGCTTCGACAGATATGAACCGCCCTTCTACTGTCAGACATCACACCAAGGAAGTCCCATGGAGGGAGGCGTGTTCTGGTCCGGGGCTGGCGAGAACCAGGAGTATGAGCACCAAGACGTGTACCACGACACAGGATACATCGGAAGGAATTACGCGTACGAGGAAATGCAGATTTTGGGGAACGAACCCTACGATGTCTATCATAACACTATGATGCATCAAAACTACCCGCAAAATAACGGAGGCCTGGACTGTGACATGCAAGCCATACCTCGTTACGACAGGCCGCCGCCGTCGTTCGTGAGAGTGGTGAAGAGGAGGACCACGGCCAACAAGAAGGAGAGGCGGAGGACGCAGAGCATCAACACGGCCTTCACCGACCTGAGAGAGTGCATCCCCAACGTGCCGCCCGACACCAAGCTGTCCAAGATGGTGCGACCGAGATCGCAGAGCATCAATGTAGCGTTCTCGAAACTCAGAGATCGTATACCGAGCGTGCTCCCCGACACTAAGATGACTAAGATCAAGACGCTCCGCCTGGCCACGTCGTACATCTCGTATCTGCTCAAGGTGTTGGAGACTGACGGTGAACCCGCGGGAGGGTTCCGGGCGGAGCTGCACCACGCGCCGCCGAGGAGACGGGCCGCGGAGGCACAGAACGTCGAGAAGAAGGGTAAAGGTCGTACTGGATGGCCGCAACACGTCTGGGCGCTCGAACTAAAGAGCGAGAATAATTTGCAAACATAA
>DPOGS200786-PA
MSSYGSTSPSDEGFDRYEPPFYCQTSHQGSPMEGGVFWSGAGENQEYEHQDVYHDTGYIGRNYAYEEMQILGNEPYDVYHNTMMHQNYPQNNGGLDCDMQAIPRYDRPPPSFVRVVKRRTTANKKERRRTQSINTAFTDLRECIPNVPPDTKLSKMVRPRSQSINVAFSKLRDRIPSVLPDTKMTKIKTLRLATSYISYLLKVLETDGEPAGGFRAELHHAPPRRRAAEAQNVEKKGKGRTGWPQHVWALELKSENNLQT-