Monarch geneset OGS2.0

DPOGS200836
TranscriptDPOGS200836-TA711 bp
ProteinDPOGS200836-PA236 aa
Genomic positionDPSCF300071 - 294823-295533
RNAseq coverage263x (Rank: top 40%)
Annotation
HeliconiusHMEL0126441e-12186.44% 
BombyxBGIBMGA009893-TA4e-11178.39% 
DrosophilaRrp40-PA1e-7053.12% 
EBI UniRef50UniRef50_F4WJ751e-8364.14%Exosome complex exonuclease RRP40 n=13 Tax=Neoptera RepID=F4WJ75_ACREC
NCBI RefSeqNP_001153670.11e-11079.24%exosome complex exonuclease Rrp40 [Bombyx mori]
NCBI nr blastpgi|2376489862e-10979.24%exosome complex exonuclease Rrp40 [Bombyx mori]
NCBI nr blastxgi|2376489864e-10779.24%exosome complex exonuclease Rrp40 [Bombyx mori]
Group
KEGG pathwaycqu:CpipJ_CPIJ0165794e-81 
 K03681 (RRP40, EXOSC3)maps-> RNA degradation
Orthology groupMCL11884 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200836-TA
ATGAAAGCTTCTATTGGAGATGTCGTTTTACCGGGAGATTACTGTGAAGAAATAACAGTGGCCGGCGAAAAAACAAAAGTAATCATAGGTCCAGGATTAAGAAGAGAACTTGACCGCGTGTATATCACAAAAGCTGGAGTCCTTAAAAAACGAAACCCATGTACTTATTGGGTAGACAGTTACCAAAAGCGGTACGTTCCATCGAGGGGTGAAAATGTGATTGGTGTTGTGGTGCAGAAAGCTGGTGACATATTTAGAGTAGACGTCGGCGGTAGTATCACTGCAGCATTATCCTATTTATCGTTCGAAGGAGCTACAAAAAAGAACAGGCCTGAGGTACAAATGGGAGATATTGTTTACGCCAAAATGCTGGTAGCTAGTAAAGATATGGAACCAGAGTTAGTTTGTGTCGATTCACATGGAAAAAAAGGGCGCTTAGGCGTGCTAAGTGATGGATTCTTATTTAAATGTTCTTTAAATTTAGTACGAAAAATATTGAACCCTTCATGTCCCTTACTTGAGTCCTTGAAAAATGAATGGCCTTTTGAGATGGCAGCTGGCATGAATGGTAGGATTTGGATCAAAGCTAACTCCATGAGAGAAACAATTGCTCTTGGTAATGCTATTTTGGGCGCAGAATATCAAAGTGATGAAGAAATTAAACTAATATGTTCTAACATAGCTTCTATATTAGCAGGACATATTTCGTGA

Protein sequence:

>DPOGS200836-PA
MKASIGDVVLPGDYCEEITVAGEKTKVIIGPGLRRELDRVYITKAGVLKKRNPCTYWVDSYQKRYVPSRGENVIGVVVQKAGDIFRVDVGGSITAALSYLSFEGATKKNRPEVQMGDIVYAKMLVASKDMEPELVCVDSHGKKGRLGVLSDGFLFKCSLNLVRKILNPSCPLLESLKNEWPFEMAAGMNGRIWIKANSMRETIALGNAILGAEYQSDEEIKLICSNIASILAGHIS-