| DPOGS200866 | ||
|---|---|---|
| Transcript | DPOGS200866-TA | 333 bp |
| Protein | DPOGS200866-PA | 110 aa |
| Genomic position | DPSCF300071 + 442916-443761 | |
| RNAseq coverage | 591x (Rank: top 21%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012632 | 2e-59 | 99.09% | |
| Bombyx | BGIBMGA009855-TA | 2e-60 | 99.09% | |
| Drosophila | CG9548-PA | 2e-56 | 94.55% | |
| EBI UniRef50 | UniRef50_Q7RTV0 | 5e-55 | 96.33% | PHD finger-like domain-containing protein 5A n=264 Tax=root RepID=PHF5A_HUMAN |
| NCBI RefSeq | NP_001091825.1 | 7e-58 | 99.09% | PHD-finger 5A [Bombyx mori] |
| NCBI nr blastp | gi|148298705 | 2e-56 | 99.09% | PHD-finger 5A [Bombyx mori] |
| NCBI nr blastx | gi|148298705 | 1e-63 | 99.09% | PHD-finger 5A [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | api:100168643 | 3e-56 | ||
| K12834 (PHF5A) | maps-> | Spliceosome | ||
| InterPro domain | [1-108] IPR005345 | 1.1e-181 | PHF5-like | |
| Orthology group | MCL13086 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200866-TA
ATGGCTAAACATCATCCGGATCTTATATTCTGTAGAAAACAACCCGGCGTCGCTATTGGCCGTTTGTGTGAAAAATGCGACGGAAAATGTGTTATTTGCGACTCTTACGTGCGACCCTGCACGTTGGTGCGTATCTGCGATGAGTGTAACTACGGGTCGTATCAAGGGAGATGTGTTATATGTGGCGGGCCTGGAGTATCAGACGCATATTATTGTAAAGAGTGTACCACACAGGAGAAGGATAGAGATGGATGTCCGAAGATAGTCAATTTAGGAAGCTCGAAGACAGATTTGTTCTATGAGAGAAAGAAATATGGATTCAGAAGACACTAA
>DPOGS200866-PA
MAKHHPDLIFCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTTQEKDRDGCPKIVNLGSSKTDLFYERKKYGFRRH-