| DPOGS201084 | ||
|---|---|---|
| Transcript | DPOGS201084-TA | 648 bp |
| Protein | DPOGS201084-PA | 215 aa |
| Genomic position | DPSCF300185 + 157169-157909 | |
| RNAseq coverage | 434x (Rank: top 28%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL004620 | 6e-23 | 65.88% | |
| Bombyx | BGIBMGA001392-TA | 1e-49 | 60.54% | |
| Drosophila | dsf-PA | 4e-16 | 51.28% | |
| EBI UniRef50 | UniRef50_E3X806 | 5e-46 | 96.70% | Putative uncharacterized protein n=2 Tax=Coelomata RepID=E3X806_ANODA |
| NCBI RefSeq | XP_001655964.1 | 8e-47 | 93.62% | coup transcription factor [Aedes aegypti] |
| NCBI nr blastp | gi|340729306 | 5e-46 | 96.70% | PREDICTED: steroid receptor seven-up, isoforms B/C-like [Bombus terrestris] |
| NCBI nr blastx | gi|157131845 | 6e-44 | 93.62% | coup transcription factor [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003707 | 8.7e-30 | steroid hormone receptor activity | |
| GO:0005634 | 8.7e-30 | nucleus | ||
| GO:0006355 | 8.7e-30 | regulation of transcription, DNA-dependent | ||
| GO:0043401 | 8.7e-30 | steroid hormone mediated signaling pathway | ||
| GO:0003700 | 8.7e-30 | sequence-specific DNA binding transcription factor activity | ||
| GO:0003677 | 6.3e-25 | DNA binding | ||
| GO:0004879 | 6.3e-25 | ligand-dependent nuclear receptor activity | ||
| KEGG pathway | ||||
| InterPro domain | [29-108] IPR008946 | 8.7e-30 | Nuclear hormone receptor, ligand-binding | |
| [27-39] IPR003068 | 6.3e-25 | Transcription factor COUP | ||
| [31-92] IPR000536 | 6.6e-10 | Nuclear hormone receptor, ligand-binding, core | ||
| Orthology group | MCL19330 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201084-TA
ATGAAATACTCCGACGCTCAATGGAGCGTGAACGACGAGCTGCGTGTGACTCGAATGTCGATTGACCAAAGATTTTCCTCTGTTCCAGATGCCTGTGGACTATCAGACGTAACGCACATAGAGAGCCTTCAAGAGAAATCCCAATGCGCTCTCGAAGAGTACTGCAGAAGCCAGTACCCCAACCAGCCGACGCGTTTCGGGAAACTGCTTCTTAGGCTACCTTCATTACGGACAGTGAGCTCTCAGGTCATAGAACAGCTGTTCTTCGTGAGGCTGGTGGGGAAGACACCCATCGAGACCCTGATAAGGGACATGCTGTTATCCGGCAGCTCGTTCTCGTGGCCCTACATGGCGACCATGTACCGGCGGGAAGCCGAGGACGTCGTGACGTCTTCCAGCGAGTTCCCGGAGGCGGAGGCCGCTCCCTCCGAGGACTACTTCGGCTCGCGCGTCAGAGACGACAGGGCGGAACCCTGCCCCGACTTCGACCCCATCTCAGCGTTCTACCCTCCGAAGAGCACAGAAAACGAAGTCTTCGATACAAGCAATAATTGTGAAACACAAAAAAACGCTCAAAAAACTTCCATGATGATCGAGAACCTCCTCAACATCAGAAGTGACTCGTGTTCCCAGTCCCGCGACAAATAA
>DPOGS201084-PA
MKYSDAQWSVNDELRVTRMSIDQRFSSVPDACGLSDVTHIESLQEKSQCALEEYCRSQYPNQPTRFGKLLLRLPSLRTVSSQVIEQLFFVRLVGKTPIETLIRDMLLSGSSFSWPYMATMYRREAEDVVTSSSEFPEAEAAPSEDYFGSRVRDDRAEPCPDFDPISAFYPPKSTENEVFDTSNNCETQKNAQKTSMMIENLLNIRSDSCSQSRDK-