DPOGS201113 | ||
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Transcript | DPOGS201113-TA | 525 bp |
Protein | DPOGS201113-PA | 174 aa |
Genomic position | DPSCF300137 - 200029-201384 | |
RNAseq coverage | 13673x (Rank: top 1%) |
Annotation | ||||
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Heliconius | HMEL017985 | 5e-86 | 83.33% |   |
Bombyx | BGIBMGA013680-TA | 3e-83 | 79.21% |   |
Drosophila | CG10664-PA | 1e-51 | 54.14% |   |
EBI UniRef50 | UniRef50_E9GI31 | 1e-56 | 63.51% | Putative uncharacterized protein n=3 Tax=Coelomata RepID=E9GI31_DAPPU |
NCBI RefSeq | NP_001073120.1 | 7e-82 | 79.21% | cytochrome c oxidase polypeptide IV [Bombyx mori] |
NCBI nr blastp | gi|354549511 | 1e-81 | 80.90% | cytochrome c oxidase polypeptide IV [Antheraea yamamai] |
NCBI nr blastx | gi|354549511 | 6e-82 | 80.90% | cytochrome c oxidase polypeptide IV [Antheraea yamamai] |
Group | ||||
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Gene Ontology | GO:0004129 | 5.3e-64 | cytochrome-c oxidase activity | |
KEGG pathway | aga:AgaP_AGAP008727 | 1e-59 |   | |
  | K02263 (COX4) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Cardiac muscle contraction | |
  |   |   | Parkinson's disease | |
InterPro domain | [31-174] IPR004203 | 5.3e-64 | Cytochrome c oxidase subunit IV | |
[46-59] IPR013288 | 1.6e-21 | Cytochrome c oxidase subunit IV, subgroup | ||
Orthology group | MCL11225 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS201113-TA
ATGGCCAGCCATCTTTTGCGCCGAGCGCTGTTTGATGCTATCCGTGTCCCAGCTGGAACCCGTGCAGCGAGTGAAATTGCCAAGATCGGCGATCGTGAGTGGGTGGGCTATGGTTTCAATGGCCGTCCTAATTACGTAGACAGGAACGATTTCCCCTTACCCGCTGTTAGGTTCAGGGCTGACACACCCGATGTTAAGGCTCTCCGTGAAAAGGAAAAGGGAGACTGGCGTAAGTTGACCCTGGAGGAGAAGAAAGCCTTGTACCGAGCTTCATTCTGTCAGACGTTTGCCGAGTTCCAAGCACCCACCGGGGAGTGGAAGGGAGCGCTCGGCTGGGCGCTTGTTATGGCGTCCATGTCTTTATGGTTCTACATGGCCATGAAGAAGTTTGTATACAACCCCTTGCCCGAGTCCTTCAGCGAGGAGTCTCAGAAGGCGCAGCTGAAACGTATGTTGGACTTGAAGGTGAACCCTGTGGACGGCCTCTCCTCCAAGTGGGACTACGAGAACAACCGCTGGAAGTAA
>DPOGS201113-PA
MASHLLRRALFDAIRVPAGTRAASEIAKIGDREWVGYGFNGRPNYVDRNDFPLPAVRFRADTPDVKALREKEKGDWRKLTLEEKKALYRASFCQTFAEFQAPTGEWKGALGWALVMASMSLWFYMAMKKFVYNPLPESFSEESQKAQLKRMLDLKVNPVDGLSSKWDYENNRWK-