| DPOGS201156 | ||
|---|---|---|
| Transcript | DPOGS201156-TA | 369 bp |
| Protein | DPOGS201156-PA | 122 aa |
| Genomic position | DPSCF300065 + 151451-152263 | |
| RNAseq coverage | 392x (Rank: top 31%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010445 | 4e-49 | 76.00% | |
| Bombyx | BGIBMGA003954-TA | 1e-51 | 74.60% | |
| Drosophila | Atg12-PB | 5e-35 | 58.18% | |
| EBI UniRef50 | UniRef50_E3UKI7 | 5e-48 | 73.02% | Autophagy-like protein Atg12 n=5 Tax=Neoptera RepID=E3UKI7_9NEOP |
| NCBI RefSeq | NP_001135963.1 | 3e-50 | 74.60% | autophagy related protein Atg12-like protein [Bombyx mori] |
| NCBI nr blastp | gi|215820608 | 8e-49 | 74.60% | autophagy related protein Atg12-like protein [Bombyx mori] |
| NCBI nr blastx | gi|215820608 | 9e-50 | 74.60% | autophagy related protein Atg12-like protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005737 | 3.5e-63 | cytoplasm | |
| GO:0000045 | 3.5e-63 | autophagic vacuole assembly | ||
| KEGG pathway | phu:Phum_PHUM235290 | 5e-40 | ||
| K08336 (ATG12) | maps-> | RIG-I-like receptor signaling pathway | ||
| Regulation of autophagy | ||||
| InterPro domain | [36-122] IPR007242 | 3.5e-63 | Autophagy-related protein 12 | |
| Orthology group | MCL12846 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201156-TA
ATGAGTGATGAAAAACAATCAGATGATACATCCCAAGCAGAAATCGTAAACAGTGAAAAAGATGAACAGAAAGATAACAGTGACAGAGGAAAAACAGACAAAGTTAAAATTGATATTTTGCTAAAGGCGACAGGTGACGCTCCTATAATGAAAAAAAAGAAATGGGCTGTGGATGCTGAGAAACCTATCGGATGGATCATGGAATTTGTTAAAAAGTACCTAAAACTAGAACCTGAAGAAAGATTGTTTCTATATGTCAATCAAACATTTGCACCGTCCCCCGACCAGCTGATCAAGAATTTGTATGAATGTTTTGGGACGGACGGTAAACTGGTGCTGCATTATTGTAAGAGTCAAGCTTGGGGATGA
>DPOGS201156-PA
MSDEKQSDDTSQAEIVNSEKDEQKDNSDRGKTDKVKIDILLKATGDAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEPEERLFLYVNQTFAPSPDQLIKNLYECFGTDGKLVLHYCKSQAWG-