Monarch geneset OGS2.0

DPOGS201184
TranscriptDPOGS201184-TA2184 bp
ProteinDPOGS201184-PA727 aa
Genomic positionDPSCF300262 + 14660-28008
RNAseq coverage50x (Rank: top 70%)
Annotation
HeliconiusHMEL0171320.089.26% 
BombyxBGIBMGA014231-TA0.087.27% 
DrosophilaSerT-PA0.078.64% 
EBI UniRef50UniRef50_P519050.078.64%Sodium-dependent serotonin transporter n=58 Tax=Bilateria RepID=SC6A4_DROME
NCBI RefSeqNP_001037436.10.092.36%serotonin transporter [Bombyx mori]
NCBI nr blastpgi|244150900.092.62%high-affinity serotonin transporter [Manduca sexta]
NCBI nr blastxgi|244150900.093.18%high-affinity serotonin transporter [Manduca sexta]
Group
Gene OntologyGO:00160213.9e-180integral to membrane
GO:00053283.9e-180neurotransmitter:sodium symporter activity
GO:00068363.9e-180neurotransmitter transport
KEGG pathway 
InterPro domain[1-480] IPR0001750Sodium:neurotransmitter symporter
Orthology groupMCL10151 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS201184-TA
ATGCTATTATTCGGTGGATTACCGCTGTTCTTCATGGAGCTGGCTCTGGGGCAGTTCCACAGATGCGGATGTTTAACACTTTGGAAGAGAATCTGCCCCGCGTTAAAAGGGGTAGGTTACGCCATATGCATGATCGATATCTACATGGGCATGTACTACAACACGATCATCGGCTGGGCGGTTTACTACCTCGTGGCATCCCTGGCCTCCATCAACTCCGTGCTGCCCTGGACTAGTTGCGACAACGAATGGAACACTCCTCTCTGCTCACCAGTTACATCCCCGCAGAACAATCCTAATGCTACCACGCCGGCTAAAGAATTCTTTGAACGTAACGTTTTGGAACAACAGCGATCCAACGGCCTGGATGATATGGGCCCTATAAAACCATCGCTTGCTCTTTGCGTCTTCGGTGTCTTCGTATTGGTATACTTTTCTTTATGGAAAGGTGTAAGAAGTGCTGGCAAGGTGGTGTGGGTCACAGCATTAGCTCCGTACGTAGTGCTTCTGATATTGCTGGCAAGAGGGGTCACGCTTCCCGGTGCTACTGAAGGCATTCGATACTATTTAACACCGGAGTGGCATAAGCTACAGAATACAAAGGTGTGGGTGGATGCGGCCTCTCAAATATTCTTCTCTCTGGGTCCGGGCTTTGGCACACTTCTGGCTCTGTCCAGCTACAACAAGTTCAACAACAACTGCTACCGCGACGCTATCATCACCTCCTCAATCAACTGCCTCACTAGCTTTCTCGCTGGATTTGTTATATTCTCCGTTTTAGGTTACATGGCACACGTTCAGAACAAGAGCATCGAGGAGGTAGGTCTCGAAGGTCCGGGGCTAGTGTTCATCGTTTACCCGGAGGCCATCGCCACTATGACCGGTTCAGTCTTTTGGGCCATCATCTTCTTCCTCATGCTCATCACCCTCGGATTAGACAGCACTTTTGGAGGTCTGGAGGCAGTCACCACAGCTCTATGTGACGAGTATCCCCGCGCACTCGGACGGCACCGGGAAGTGTTCGTCGCCTTTTTGTTGCTCTTTATATACATCTGCGCTCTTCCTACCACAACATACGGCGGGGTATACCTAGTGGATTTATTGAACGTGTATGGACCTGGTCTGGCGATCCTGTTTGTTGTGTTCGCGGAGGCCGCTGGCGTGTGCTGGGTTTACGGTGTGGGGCGTTTCTCAGAGGATGTGAGGACAATGTTAGGACACAAACCTGGCTGGTTCTGGAGAACCTGCTGGTCTTACATCAGCCCTGTGTTCCTGCTGGTGCTGTTTATCTTCTCGGTGCTATCGCACGAGGAGATGCTGGGTGGAGAGTACGAGTACCCTCGCTGGTCGATCCGCGCCGGCTGGGCGATGACCGCCACCACCGTCTCCTGCATTCCAGTCTACATCATCTACAAGTTCATCATCACACCTGGCAGCTTCCTCACTAACCTATACGAATCCCAGTTAGAGTGCATCGCGCGATGGCTGAGCTGCAACGGGGAGGTGTGGGGGATGGGCCCGACGGCGGTGTTCGCGAGCGCAGCGGCGCTGTTCCTCTACAACGAGCTGGAGGCGACCATCTTTATAGCAGGCGACCACGCACACGTTTCGCCGCTCGAGAAAACTCTCGTGTCCACAATGGTGCTCGGAATGCTGGCGCTGATGATACACCTCTGGGTGTGCTCAATGCGCTTCTTTCAGTACTATCTGGACACTCTCATTAAAGATAGCCCCAACATGCTATTAGAGATGACCACCGCTAGTCTCCTGGGTCAGACGGATATGGTTCCCCTGGGACCGCTGACCCGCTTCCTTAAACAGCAACAGCCTCAAATCCATATAACCGTGTGCTGGTTCCTGTCGCTGTGCTACGCCGACTACGTAAGGAAGCACTATTGTCAACGATTTAACATGCCCTATCTGGAACAGTGGCAAACAGAACTCCACGCGCGCGCCACACACGGCGTGAACACCACCATGCAGAAAGTGAACAGTTTCGTGGGGGCTATCCATCAGCGGCTGAGAGGCTACTCCGCTACGCCACTAACTTCTGACGCACATACGAAAACCGATGTCCGTGCAGCAGTGCGCCGCACGCCGGCGAGCGTACTTCTAGCACTTCCATCAAAAGAAACGATCAGTGATCGCCGGCCCTGGTGGTGTCAGGAGTTGGATGACAAATAA

Protein sequence:

>DPOGS201184-PA
MLLFGGLPLFFMELALGQFHRCGCLTLWKRICPALKGVGYAICMIDIYMGMYYNTIIGWAVYYLVASLASINSVLPWTSCDNEWNTPLCSPVTSPQNNPNATTPAKEFFERNVLEQQRSNGLDDMGPIKPSLALCVFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLLILLARGVTLPGATEGIRYYLTPEWHKLQNTKVWVDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDAIITSSINCLTSFLAGFVIFSVLGYMAHVQNKSIEEVGLEGPGLVFIVYPEAIATMTGSVFWAIIFFLMLITLGLDSTFGGLEAVTTALCDEYPRALGRHREVFVAFLLLFIYICALPTTTYGGVYLVDLLNVYGPGLAILFVVFAEAAGVCWVYGVGRFSEDVRTMLGHKPGWFWRTCWSYISPVFLLVLFIFSVLSHEEMLGGEYEYPRWSIRAGWAMTATTVSCIPVYIIYKFIITPGSFLTNLYESQLECIARWLSCNGEVWGMGPTAVFASAAALFLYNELEATIFIAGDHAHVSPLEKTLVSTMVLGMLALMIHLWVCSMRFFQYYLDTLIKDSPNMLLEMTTASLLGQTDMVPLGPLTRFLKQQQPQIHITVCWFLSLCYADYVRKHYCQRFNMPYLEQWQTELHARATHGVNTTMQKVNSFVGAIHQRLRGYSATPLTSDAHTKTDVRAAVRRTPASVLLALPSKETISDRRPWWCQELDDK-