| DPOGS201218 | ||
|---|---|---|
| Transcript | DPOGS201218-TA | 207 bp |
| Protein | DPOGS201218-PA | 68 aa |
| Genomic position | DPSCF303650 + 206-412 | |
| RNAseq coverage | 60x (Rank: top 68%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015720 | 2e-24 | 71.21% | |
| Bombyx | BGIBMGA010261-TA | 1e-25 | 71.21% | |
| Drosophila | Msh6-PA | 2e-08 | 45.45% | |
| EBI UniRef50 | % | |||
| NCBI RefSeq | XP_002095136.1 | 7e-07 | 45.45% | GE19856 [Drosophila yakuba] |
| NCBI nr blastp | % | |||
| NCBI nr blastx | % | |||
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005524 | 3.6e-06 | ATP binding | |
| GO:0006298 | 3.6e-06 | mismatch repair | ||
| GO:0030983 | 3.6e-06 | mismatched DNA binding | ||
| KEGG pathway | dya:Dyak_GE19856 | 2e-06 | ||
| K08737 (MSH6) | maps-> | Colorectal cancer | ||
| Pathways in cancer | ||||
| Mismatch repair | ||||
| InterPro domain | [36-68] IPR007696 | 3.6e-06 | DNA mismatch repair protein MutS, core | |
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201218-TA
ATGGCTCAGTACAATAGATATGTACCGCCTGATATGCTAAATAGCACCTTAACGGAAGTCAATAACGATCAAAATGACTGGCAAGGCGGCAGTACTATGGTGTTAGATGCGATCACACTGAAAAATCTACGTATAGTCCAAGATGAGGGCTGCTTGTATGACAGATTGAACTTTTGTTCTACAGCTATGGGGAAAAGGTGGTTTTAA
>DPOGS201218-PA
MAQYNRYVPPDMLNSTLTEVNNDQNDWQGGSTMVLDAITLKNLRIVQDEGCLYDRLNFCSTAMGKRWF-