Monarch geneset OGS2.0

DPOGS201342
TranscriptDPOGS201342-TA2448 bp
ProteinDPOGS201342-PA815 aa
Genomic positionDPSCF300176 + 722609-727213
RNAseq coverage190x (Rank: top 48%)
Annotation
Heliconius% 
BombyxBGIBMGA003126-TA0.084.90% 
DrosophilaCG11092-PA4e-17340.58% 
EBI UniRef50UniRef50_B0WEZ20.050.37%Nuclear pore complex protein Nup93 n=4 Tax=Culicidae RepID=B0WEZ2_CULQU
NCBI RefSeqXP_001655638.10.050.86%nuclear pore complex protein nup93 (nucleoporin nup93) (dead eye protein) [Aedes aegypti]
NCBI nr blastpgi|1571302000.050.86%nuclear pore complex protein nup93 (nucleoporin nup93) (dead eye protein) [Aedes aegypti]
NCBI nr blastxgi|1571302000.050.86%nuclear pore complex protein nup93 (nucleoporin nup93) (dead eye protein) [Aedes aegypti]
Group
Gene OntologyGO:00068108.6e-254transport
GO:00056438.6e-254nuclear pore
KEGG pathway 
InterPro domain[1-815] IPR0072318.6e-254Nucleoporin interacting component Nup93/Nic96
Orthology groupMCL11176 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS201342-TA
ATGGCCGACGAGGATTTTAGTAAACTTTTACAACAAGCTGAACAATTAACAACTGAGATAGAGGGAAATGAAGAGCTGCCAAGAGTGGAACGTTCTTTAGGTCAAGTTTTGGAAGCGTCGCATGAATTGTATTCCAGAGTAATTCAATCCGGCGCCAATGATATTCAAGCCCATCTGCTATTTGGGTCCAAAGGAATTGACCTTCAACAAATATCACAGAAATTGGAAACATTGTCTTCTAAAAGAACATTTGAACCCCTACAGCCTATTGCTGATTCTGATATTGAGAGCTTTCTTAAGAATGAAAGGGAAAATGCTATTTTATCACTTATTGATGAAGTTAACAAAAATTCATTACAAACAACTGAGGATCAAAAATGGGAGCATATGCTATCGGAATGGAACAAAGAAAAAATAAAGCTCATGAATGCCATGATCGGCCCATCTCAGAACTGGCTCGATTTGAAAAGAGCACCAGAACAGCCAAGTATTGCTGATACACCAAAGAAGTTTGGTCACTCTATGCTGGATAATATTGAAGCTGCATATGCTAGACAGGTTCAGTTGTACAATAAACTGGTATTTCAAGGCGCTAAATCCAAGACTGCTTTATGTCAGAAGTTTGCACAAGTCGCGGAAGAGTTTAATGACCCTAAAGTTAAAGAAATGTGGGAGATAATAAAAACAATGGCCAACATCCCTGCTCTTGTGAGAGACGAAGATCCATTAAAAGCCAGAGGTAACCCCACAATACAGCAATGTTTAATTAGTCAAGGGAAAAAATACTTAGAGAGGAGATACAAACAGTACATGAGTGATGTAGTCAGAGCAAACCCTGGAGCAGCAATGAGGGGAGGCGAGCCGGGAACGTTTCCCTTAGTAAGGGGTTTTGTAGGGCTGCGTCTTCAGGGTCAGAATACACAAGGGTTGACGGATGGTGTGATTGATGATCGTCCATTGTGGCCTATGGTGTATTATTGCTTGAGAAGTGGAGATGCTAATGCAGCATTACACTGTTTGAGGAAAGCTGGCCGAGATCACGAGGAATTTATAGCAGCTCTAGAAGAATATATAAGAGAACCTGAGAAGCCGTTAAGTGATAAGTTACAAACGGCAATCAACTTCCAATACAGGATTCAAGTTCGCAACTCTACAGATCCCTACAAAAGAGCTGTGTACAGTGTAATCAGATGCTGTGATGTCAGTGACGAACATTCAGAAGTCGCCCGTACGGCCGATGACTATCTATGGCTTAAACTGTCCATCATCAAGACTCGCCCTAACAATGAATCTGAATCATTTAGTTATTCGGACTTACAGAAGATGATTTTGGAAGAATATGGAGAAACCCATTACCACGCGTATGAGAAGCCCCTTGTATATTTCCAAGTGTTGACATTAACGGGTCAATTTGAACCTGCTATTGAGTTTTTATCAAGGATACCAAGATATCAAGTACATGGAGTCCATATGGCATTAGCTTTGCATGATGTCTATATGTTGGGGACACCAAGAAATGTACAGGCGCCGCTATTGTCAGTGGATACAGATGATCCCATACCTCTAAGGCGCTTGAACTTAGCTAGACTTATTTTACTTTATGTTAGAAAGTTTGAACTATCCGACCCGTCAGACGCTCTCCACTATTACTTTTTCCTAAGAAATCTGAAAGACCCCAGTGGTAAGAACCTGTTCATGTGTTGTTGCACGGATTTGTCGCTGGAGAGTCGAGACTATGAACTGCTTTTTGGAAAGATGGATCCGGCCACCGGCCTTCGTTCAACCGGATTATTAGACCAGTTTAACAATCCTAATATTGATAACACGGTCATTGCCCTCAATGTAGCCGAACAGCTGGTGAATAAAGGATTGTTTGAAGACGCCATAATAGTGTATGACATTGCTGGAAACTTGGAGAAAGTATTGGAGCTGTTCTGTGTATTGCTGGCCCAAGTTGTGAGTAGTGGTGGCGCATTACGAGAGCGTCTACGTTCGCTGTCCGAGCACGTGTCGCGGCGTCTCCGTTCAGAAGAACTGCCATCTCCTCACCTGGTCGACGCTTACAACAAACTGTGCAAGTTGATGACATTCTTTGATCAGTTCCATGCTGAAAATTACGAAGGTGCCTTGGAGACGATCCGCGCTTGCGAGCTTGTACCTCTAAGCTCGGATGAGGTGTCGGCTCGAGTAGCTGGAGCGCGAAACGCTCGAGGCGAGCTATTACGAGCACTTCCGGCTGTCCTACGAGCGTTATGTCATATCCTGCTTGCTATGAGGCAGAAGCTACGTACTGCACAGCCTACCCTCAGTACACATACTGCTAATAAGCAACTAGAATGGCTGAGAGAACAGGCTGAGGTTTTGAATACATTTGCTGGGAACATCGCGTACAGGATGCCCGGTGACACCTACAGCCAGCTAGCTCAGATGCAAGTCCTCATGCATTGA

Protein sequence:

>DPOGS201342-PA
MADEDFSKLLQQAEQLTTEIEGNEELPRVERSLGQVLEASHELYSRVIQSGANDIQAHLLFGSKGIDLQQISQKLETLSSKRTFEPLQPIADSDIESFLKNERENAILSLIDEVNKNSLQTTEDQKWEHMLSEWNKEKIKLMNAMIGPSQNWLDLKRAPEQPSIADTPKKFGHSMLDNIEAAYARQVQLYNKLVFQGAKSKTALCQKFAQVAEEFNDPKVKEMWEIIKTMANIPALVRDEDPLKARGNPTIQQCLISQGKKYLERRYKQYMSDVVRANPGAAMRGGEPGTFPLVRGFVGLRLQGQNTQGLTDGVIDDRPLWPMVYYCLRSGDANAALHCLRKAGRDHEEFIAALEEYIREPEKPLSDKLQTAINFQYRIQVRNSTDPYKRAVYSVIRCCDVSDEHSEVARTADDYLWLKLSIIKTRPNNESESFSYSDLQKMILEEYGETHYHAYEKPLVYFQVLTLTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQAPLLSVDTDDPIPLRRLNLARLILLYVRKFELSDPSDALHYYFFLRNLKDPSGKNLFMCCCTDLSLESRDYELLFGKMDPATGLRSTGLLDQFNNPNIDNTVIALNVAEQLVNKGLFEDAIIVYDIAGNLEKVLELFCVLLAQVVSSGGALRERLRSLSEHVSRRLRSEELPSPHLVDAYNKLCKLMTFFDQFHAENYEGALETIRACELVPLSSDEVSARVAGARNARGELLRALPAVLRALCHILLAMRQKLRTAQPTLSTHTANKQLEWLREQAEVLNTFAGNIAYRMPGDTYSQLAQMQVLMH-