| DPOGS201397 | ||
|---|---|---|
| Transcript | DPOGS201397-TA | 630 bp |
| Protein | DPOGS201397-PA | 209 aa |
| Genomic position | DPSCF300083 + 542636-549149 | |
| RNAseq coverage | 408x (Rank: top 30%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012855 | 3e-100 | 84.21% | |
| Bombyx | BGIBMGA001999-TA | 2e-94 | 87.85% | |
| Drosophila | CG8519-PA | 1e-86 | 70.48% | |
| EBI UniRef50 | UniRef50_UPI00020618FE | 4e-85 | 72.25% | UPI00020618FE related cluster n=1 Tax=unknown RepID=UPI00020618FE |
| NCBI RefSeq | XP_001119889.1 | 1e-91 | 76.96% | PREDICTED: similar to CG8519-PA [Apis mellifera] |
| NCBI nr blastp | gi|364023655 | 1e-100 | 83.25% | seminal fluid protein CSSFP052 [Chilo suppressalis] |
| NCBI nr blastx | gi|364023655 | 7e-96 | 83.25% | seminal fluid protein CSSFP052 [Chilo suppressalis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016020 | 2.3e-83 | membrane | |
| GO:0007165 | 2.3e-83 | signal transduction | ||
| GO:0006184 | 2.3e-83 | GTP catabolic process | ||
| GO:0005525 | 2.3e-83 | GTP binding | ||
| GO:0003924 | 2.3e-83 | GTPase activity | ||
| GO:0007264 | 1.5e-27 | small GTPase mediated signal transduction | ||
| GO:0015031 | 1.6e-10 | protein transport | ||
| KEGG pathway | ||||
| InterPro domain | [1-187] IPR020849 | 2.3e-83 | Small GTPase superfamily, Ras type | |
| [17-173] IPR001806 | 1.5e-27 | Small GTPase superfamily | ||
| [15-157] IPR005225 | 1.4e-13 | Small GTP-binding protein domain | ||
| [16-175] IPR003579 | 1.6e-10 | Small GTPase superfamily, Rab type | ||
| Orthology group | MCL16675 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201397-TA
ATGACTTCTCGGGGCATCAGGCGGAAGAAATCTTCGCTGTCTGAAGTTAAAGTTGCGGTAGTGGGTGCACCTTCCGTCGGAAAAAGTGCTTTGACAGTTCGATTTCTCACAAAACGGTATATTGGTGAATATGATCATCAACAAGAGAGCAAATACAAGCATGAAGCACTTCTTGACGGTGAACCAATACTTTTTGAAATATTGGACACATGTCCAAAGACTCTAGACGAATTACCAGGGAGTGAAGTGGCTCAGTGGGCGGACGGACTGTTTCTCGTTTATTCTATAACTGATCGGGGATCATTCAACTACATACGACGAGCGAAGCAGAACCTACATCCAGAAGTACCAATTACGTTAGTAGGAAATAAAGCGGATATGGTCCATCTGAGACAGGTCAGTCAAGAAGAAGGTGAAATCTTAGCCAAAGACTTTGAGTGTAGCTTCGCAGAAATAGCGGCAGCGGAACAAGTGAACCAGGTCGGCGAAGTATTCTTTGATTTGTGTCGTGAAGTTCTGACACATCGCAGAAGAGCTAAACATAGTCTTCTAGACAGAATGTTGGGATCAAAGACAGCGTACAGAGTATACTCTCGTGGCAAGAGTGACAGCGCTCTACCCAAAGACTAA
>DPOGS201397-PA
MTSRGIRRKKSSLSEVKVAVVGAPSVGKSALTVRFLTKRYIGEYDHQQESKYKHEALLDGEPILFEILDTCPKTLDELPGSEVAQWADGLFLVYSITDRGSFNYIRRAKQNLHPEVPITLVGNKADMVHLRQVSQEEGEILAKDFECSFAEIAAAEQVNQVGEVFFDLCREVLTHRRRAKHSLLDRMLGSKTAYRVYSRGKSDSALPKD-