| DPOGS201629 | ||
|---|---|---|
| Transcript | DPOGS201629-TA | 192 bp |
| Protein | DPOGS201629-PA | 63 aa |
| Genomic position | DPSCF302224 + 338-529 | |
| RNAseq coverage | 98x (Rank: top 61%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA008929-TA | 9e-19 | 81.40% | |
| Drosophila | mtRNApol-PA | 6e-15 | 72.09% | |
| EBI UniRef50 | UniRef50_F6TLB0 | 4e-14 | 56.36% | Polymerase (RNA) mitochondrial (DNA directed) (Fragment) n=1 Tax=Mus musculus RepID=F6TLB0_MOUSE |
| NCBI RefSeq | XP_002737494.1 | 1e-14 | 56.60% | PREDICTED: CG4644-like, partial [Saccoglossus kowalevskii] |
| NCBI nr blastp | gi|348504337 | 4e-14 | 62.26% | PREDICTED: DNA-directed RNA polymerase, mitochondrial-like [Oreochromis niloticus] |
| NCBI nr blastx | gi|348504337 | 2e-13 | 62.26% | PREDICTED: DNA-directed RNA polymerase, mitochondrial-like [Oreochromis niloticus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003899 | 3.4e-22 | DNA-directed RNA polymerase activity | |
| GO:0003677 | 3.4e-22 | DNA binding | ||
| GO:0006351 | 3.4e-22 | transcription, DNA-dependent | ||
| KEGG pathway | ||||
| InterPro domain | [1-44] IPR002092 | 3.4e-22 | DNA-directed RNA polymerase, bacteriophage type | |
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201629-TA
ATGGACAAAATATTAGATTCAGCGGACAACCCTCTAGACGGTGAAGGCTGGTGGAAGATGTCTGAGGAGCCGTGGCAGACATTAGCTTGTTGTATGGAGATTGCTAACGCTGTACGATCACCCAATCCAGAAGGTAGTGTAAAATATATAAGGCTCTATAGTCTATGGAGACCTAGTTTTAACCTAAAATGA
>DPOGS201629-PA
MDKILDSADNPLDGEGWWKMSEEPWQTLACCMEIANAVRSPNPEGSVKYIRLYSLWRPSFNLK-