DPOGS201773 | ||
---|---|---|
Transcript | DPOGS201773-TA | 807 bp |
Protein | DPOGS201773-PA | 268 aa |
Genomic position | DPSCF300404 + 5510-7799 | |
RNAseq coverage | 1779x (Rank: top 7%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL009394 | 2e-141 | 92.54% |   |
Bombyx | BGIBMGA008595-TA | 3e-129 | 85.82% |   |
Drosophila | Rpn12-PA | 9e-67 | 52.08% |   |
EBI UniRef50 | UniRef50_B5XAB2 | 8e-82 | 59.85% | 26S proteasome non-ATPase regulatory subunit 8 n=6 Tax=Metazoa RepID=B5XAB2_SALSA |
NCBI RefSeq | XP_971959.1 | 3e-87 | 61.94% | PREDICTED: similar to 26S proteasome non-ATPase regulatory subunit 8 [Tribolium castaneum] |
NCBI nr blastp | gi|307192528 | 4e-87 | 61.94% | 26S proteasome non-ATPase regulatory subunit 8 [Harpegnathos saltator] |
NCBI nr blastx | gi|307192528 | 1e-90 | 61.94% | 26S proteasome non-ATPase regulatory subunit 8 [Harpegnathos saltator] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0006508 | 2.4e-141 | proteolysis | |
GO:0005838 | 2.4e-141 | proteasome regulatory particle | ||
KEGG pathway | tca:660653 | 9e-87 |   | |
  | K03031 (PSMD8, RPN12) | maps-> | Proteasome | |
InterPro domain | [7-268] IPR006746 | 2.4e-141 | 26S proteasome non-ATPase regulatory subunit Rpn12 | |
[104-237] IPR019280 | 2.1e-34 | COP9 signalosome, subunit CSN8 | ||
Orthology group | MCL13824 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS201773-TA
ATGGCTTCTGTAAAGGACGTTGCAACTCTTTATCAAAATCTTAAAACAGAATGGGCGAAAAAACCACGCAAGTTAGACAAATGTGGCGAGCTTCTCAATAAAATAAAGATTGCACTAACCCATCTTAGTTTCTTACCTAGTAATAATGAAGCCGCTAACCAAAAAGAATTGATATTAGGTCGCGATGTTTTGGAAATCGGAGCACAATGGGCTGTAGCGACTAAAGACGTAAAGGCATTTGAAAGATATATGTCTCAATTAAAATGTTACTACTTTGATTACAAAGATCACCTTCCGGAGTCAGCCTTCACTTACCAACTGTTGGGTTTAAATCTTTTGTTTTTGCTGGCTCAGAATAGAGTTGCTGAATTCCACACTGAACTCGAGCGTCTCCCTGTTGATGTGATCAGAGCGGATCCTTATGTCAAGCATCCATTGGCTTTGGAACAGTATCTGATGGAAGGAAGCTATAATAAAATTTTCTTGGCTAAGGATAATGTACCAGCAGAGAGTTACACATTGTTTATGGACACTTTACTAGATACTGTGAGAGGTGAAATAGCAGCTTGTATTGAAAAGGCTTACTTGTGTATATCAAGCACTGAAGCTGCCAGAAGGCTTAACTTACCTAATCAGCAGGCAGTTTTGGAATATGGAAAGAAGCGTAACTGGACATTGGGAGCTGATAACTGTTACCACTTCAATGCAGCTGAAGAAACTTGTATATGTGCTGCCGGCGTCTTCCCATCAGCGGAACTGGCCGAACAGACTATAGAGTATGCCAGACATCTTGAAATGATAGTATAA
>DPOGS201773-PA
MASVKDVATLYQNLKTEWAKKPRKLDKCGELLNKIKIALTHLSFLPSNNEAANQKELILGRDVLEIGAQWAVATKDVKAFERYMSQLKCYYFDYKDHLPESAFTYQLLGLNLLFLLAQNRVAEFHTELERLPVDVIRADPYVKHPLALEQYLMEGSYNKIFLAKDNVPAESYTLFMDTLLDTVRGEIAACIEKAYLCISSTEAARRLNLPNQQAVLEYGKKRNWTLGADNCYHFNAAEETCICAAGVFPSAELAEQTIEYARHLEMIV-