| DPOGS201805 | ||
|---|---|---|
| Transcript | DPOGS201805-TA | 486 bp |
| Protein | DPOGS201805-PA | 161 aa |
| Genomic position | DPSCF300145 + 92131-92693 | |
| RNAseq coverage | 404x (Rank: top 30%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007042 | 2e-68 | 75.16% | |
| Bombyx | BGIBMGA013232-TA | 1e-62 | 84.09% | |
| Drosophila | CG1307-PC | 8e-32 | 55.93% | |
| EBI UniRef50 | UniRef50_Q9Y3E5 | 2e-38 | 52.23% | Peptidyl-tRNA hydrolase 2, mitochondrial n=47 Tax=Chordata RepID=PTH2_HUMAN |
| NCBI RefSeq | XP_001657407.1 | 9e-37 | 63.79% | peptidyl-trna hydrolase [Aedes aegypti] |
| NCBI nr blastp | gi|296201869 | 1e-38 | 50.00% | PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Callithrix jacchus] |
| NCBI nr blastx | gi|134024335 | 1e-37 | 53.42% | hypothetical protein LOC549411 [Xenopus (Silurana) tropicalis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0004045 | 4.7e-48 | aminoacyl-tRNA hydrolase activity | |
| KEGG pathway | ||||
| InterPro domain | [46-161] IPR023476 | 1.3e-49 | Peptidyl-tRNA hydrolase II domain | |
| [46-161] IPR002833 | 4.7e-48 | Peptidyl-tRNA hydrolase, PTH2 | ||
| Orthology group | MCL14178 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201805-TA
ATGGAATTAAATCTTACATTCCTTTCTGGGTTAGGATGCGGCCTTTGCCTCGGTTTATCTCTTTTTGCATTAAAAAAATACACGGGACTCTTTTCTGACACAGCAAAGTCTGTTAAAAAGTTTGTATCCAACTCCGAATATAAATTAGTATTGGTCGTTCGAACCGACCTGGGAATGGGAAAAGGCAAAATGGCTGCTCAATGTTGTCATGCGGCTGTTGGAGCCTTTGAGAAGGCAATCAAAAAGGATCCTGAAGGATTAAAGCACTGGCAGAAGACGGGACAAGCTAAAGTAGCTGTTAAAACGGATTCAGTAGATGAGATCAAACAAATTTTGGACAACGCCAAGAAATTGGGCATCATCACGTCTTTAATAAGGGATGCTGGAAGGACACAGATTGCACCCAACTCTATTACAGTGCTGGGTGTAGGTCCAGCACCCAAAGATGTAATCGATAAAGTTACCGGACATTTGAAGCTCCTGTAA
>DPOGS201805-PA
MELNLTFLSGLGCGLCLGLSLFALKKYTGLFSDTAKSVKKFVSNSEYKLVLVVRTDLGMGKGKMAAQCCHAAVGAFEKAIKKDPEGLKHWQKTGQAKVAVKTDSVDEIKQILDNAKKLGIITSLIRDAGRTQIAPNSITVLGVGPAPKDVIDKVTGHLKLL-