| DPOGS201927 | ||
|---|---|---|
| Transcript | DPOGS201927-TA | 276 bp |
| Protein | DPOGS201927-PA | 91 aa |
| Genomic position | DPSCF300112 + 112356-123906 | |
| RNAseq coverage | 716x (Rank: top 18%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007308 | 2e-34 | 72.73% | |
| Bombyx | BGIBMGA011982-TA | 8e-08 | 50.00% | |
| Drosophila | LpR2-PE | 8e-12 | 53.85% | |
| EBI UniRef50 | UniRef50_UPI0002064A55 | 7e-10 | 55.56% | UPI0002064A55 related cluster n=1 Tax=unknown RepID=UPI0002064A55 |
| NCBI RefSeq | NP_001104808.1 | 5e-25 | 57.14% | lipophorin receptor isoform 1 [Bombyx mori] |
| NCBI nr blastp | gi|94470463 | 2e-24 | 60.44% | lipophorin receptor [Galleria mellonella] |
| NCBI nr blastx | gi|94470463 | 8e-27 | 60.44% | lipophorin receptor [Galleria mellonella] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 2.7e-14 | protein binding | |
| KEGG pathway | ptr:459713 | 1e-08 | ||
| K06233 (LRP2) | maps-> | Hedgehog signaling pathway | ||
| InterPro domain | [48-87] IPR002172 | 2.7e-14 | Low-density lipoprotein (LDL) receptor class A repeat | |
| Orthology group | MCL34422 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201927-TA
ATGTTCGTTTTGGTGGGCTGTCAACGGGCAGCCCCCAAATATTGTGCCATTATGTGGTGGTATATATTTTTCTGTGTAGTTTTTACTAAAACAATTGAAGTGCTTGGTACAAATGCAACCGGATCAATCCAAGTCGGCAATGTATGTTCCCAAAAGCAGTTCCAGTGTGCGAACGGGAAGTGTATACCAATAGCTTGGGTGTGCGAGGGAGACGACGACTGCGGCGACAAATCAGATGAAAATATAGAAGAATGTAAGAAAGGTAAGGTAGAATAA
>DPOGS201927-PA
MFVLVGCQRAAPKYCAIMWWYIFFCVVFTKTIEVLGTNATGSIQVGNVCSQKQFQCANGKCIPIAWVCEGDDDCGDKSDENIEECKKGKVE-