| DPOGS202018 | ||
|---|---|---|
| Transcript | DPOGS202018-TA | 462 bp |
| Protein | DPOGS202018-PA | 153 aa |
| Genomic position | DPSCF300053 - 960402-961661 | |
| RNAseq coverage | 563x (Rank: top 22%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016762 | 1e-60 | 86.03% | |
| Bombyx | BGIBMGA012567-TA | 6e-49 | 70.59% | |
| Drosophila | CG15525-PA | 8e-32 | 49.35% | |
| EBI UniRef50 | UniRef50_Q2F621 | 5e-54 | 71.90% | Coiled-coil domain containing 12-like protein n=5 Tax=Neoptera RepID=Q2F621_BOMMO |
| NCBI RefSeq | NP_001040312.1 | 9e-55 | 71.90% | coiled-coil domain containing 12-like protein [Bombyx mori] |
| NCBI nr blastp | gi|114050709 | 2e-53 | 71.90% | coiled-coil domain containing 12-like protein [Bombyx mori] |
| NCBI nr blastx | gi|114050709 | 8e-59 | 73.86% | coiled-coil domain containing 12-like protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ame:551200 | 1e-41 | ||
| K12871 (CCDC12) | maps-> | Spliceosome | ||
| InterPro domain | [6-130] IPR013169 | 8.3e-38 | mRNA splicing factor, Cwf18 | |
| Orthology group | MCL15213 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202018-TA
ATGGAAGGTGTTGGTGCTTTAGAAGAAGAAGCTCTTAAAAGAAAAGAGAGACTTAAAAATCTTAAACGAAAACACACAAATGACGAATCTGGGGACACTTCAAAAAATGAACCTGTTGTCTTGCCAAAGCCGAAGTTCAGAAGCTACAAACCACAAGATGAGAACTTACAGAAAGAAAAATTACAAGATGCTCAGCCCGCTCAGGTCGAAGAGGAAGTTAAAGATCTGGTTGAAGCTGGCAAAGAAAAGGTGGTACTTCAGGACTTGGATATATCCAGTCTAGCTCCTAGGAAGCCGGACTGGGATTTGAAGAGAGATGTAGCAAAGAAGTTGGAGAAACTTGAAAGACGAACACAGAAAGCTATCGCCGAATTAATATGGGAGAGACTTAAGGAAGGCAATGAAGAGAATTTGAGTGCATTAGTTAGTTTGAATGCTAATAAGTCTACCGAAGATGATTGA
>DPOGS202018-PA
MEGVGALEEEALKRKERLKNLKRKHTNDESGDTSKNEPVVLPKPKFRSYKPQDENLQKEKLQDAQPAQVEEEVKDLVEAGKEKVVLQDLDISSLAPRKPDWDLKRDVAKKLEKLERRTQKAIAELIWERLKEGNEENLSALVSLNANKSTEDD-