DPOGS202058 | ||
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Transcript | DPOGS202058-TA | 372 bp |
Protein | DPOGS202058-PA | 123 aa |
Genomic position | DPSCF300053 + 864411-866155 | |
RNAseq coverage | 317x (Rank: top 36%) |
Annotation | ||||
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Heliconius | HMEL016766 | 8e-50 | 95.65% |   |
Bombyx | BGIBMGA012534-TA | 2e-46 | 86.96% |   |
Drosophila | hh-PA | 2e-24 | 57.14% |   |
EBI UniRef50 | UniRef50_D4Q9P0 | 2e-28 | 70.37% | Hedgehog protein n=1 Tax=Daphnia magna RepID=D4Q9P0_9CRUS |
NCBI RefSeq | XP_001943707.1 | 1e-28 | 61.29% | PREDICTED: similar to AGAP001412-PA [Acyrthosiphon pisum] |
NCBI nr blastp | gi|309253979 | 4e-34 | 89.33% | hedgehog [Bicyclus anynana] |
NCBI nr blastx | gi|309253979 | 7e-34 | 89.33% | hedgehog [Bicyclus anynana] |
Group | ||||
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Gene Ontology | GO:0007275 | 7.8e-31 | multicellular organismal development | |
GO:0007267 | 7.8e-31 | cell-cell signaling | ||
KEGG pathway | cfa:608860 | 1e-25 |   | |
  | K11988 (SHH) | maps-> | Basal cell carcinoma | |
  |   |   | Pathways in cancer | |
  |   |   | Hedgehog signaling pathway | |
InterPro domain | [16-96] IPR000320 | 7.8e-31 | Hedgehog, N-terminal signaling domain | |
[30-93] IPR009045 | 2.6e-27 | Hedgehog/DD-peptidase | ||
Orthology group | MCL18919 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202058-TA
ATGAGGCTAACGCTGGTGCTACTGTGGCTGGGCGCTGCGGCGGCCTGTGGCCCGGGCCGTGGCTTCACCCGCCGCCACGGACCGCGCCGCATAACGCCCCTCGTCTTCAACCAGCACGACCCTAACATCAACGAGAACTCCAAGTCAGCCAGCGGACCCCCAGAGGGACGTATCACTAGAAACGACGAGAAATTCAAAGACTTAGTGCCAAATTATAATCCGGATATAGACTTCAAGGATGAAGAGGGCACGGGTGCCGATCGGCTCATGACACAGCGCGGCCTCGCTCTAATGGCTCGACAAACATCGGCTGTGTTGACAAACAAACATACATTCGCCATCAACATGCTCAGAATTTCCTCGAAGATATAG
>DPOGS202058-PA
MRLTLVLLWLGAAAACGPGRGFTRRHGPRRITPLVFNQHDPNINENSKSASGPPEGRITRNDEKFKDLVPNYNPDIDFKDEEGTGADRLMTQRGLALMARQTSAVLTNKHTFAINMLRISSKI-