DPOGS202113 | ||
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Transcript | DPOGS202113-TA | 792 bp |
Protein | DPOGS202113-PA | 263 aa |
Genomic position | DPSCF300150 + 32316-34781 | |
RNAseq coverage | 20x (Rank: top 79%) |
Annotation | ||||
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Heliconius | HMEL003965 | 7e-82 | 92.26% |   |
Bombyx | BGIBMGA006956-TA | 1e-141 | 90.11% |   |
Drosophila | Rab26-PD | 1e-76 | 66.67% |   |
EBI UniRef50 | UniRef50_Q29RR0 | 2e-75 | 66.67% | Ras-related protein Rab-26 n=4 Tax=Chordata RepID=RAB26_BOVIN |
NCBI RefSeq | XP_002422574.1 | 3e-78 | 72.40% | GTP-binding nuclear protein RAN1, putative [Pediculus humanus corporis] |
NCBI nr blastp | gi|270013222 | 3e-81 | 74.51% | hypothetical protein TcasGA2_TC011797 [Tribolium castaneum] |
NCBI nr blastx | gi|270013222 | 4e-78 | 74.51% | hypothetical protein TcasGA2_TC011797 [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0007264 | 9.6e-92 | small GTPase mediated signal transduction | |
GO:0005525 | 9.6e-92 | GTP binding | ||
GO:0015031 | 9.6e-92 | protein transport | ||
GO:0016020 | 3.9e-30 | membrane | ||
GO:0007165 | 3.9e-30 | signal transduction | ||
GO:0006184 | 3.9e-30 | GTP catabolic process | ||
GO:0003924 | 3.9e-30 | GTPase activity | ||
GO:0005622 | 1.7e-17 | intracellular | ||
GO:0006886 | 1.9e-05 | intracellular protein transport | ||
GO:0006913 | 1.9e-05 | nucleocytoplasmic transport | ||
KEGG pathway |   | |||
InterPro domain | [73-236] IPR003579 | 9.6e-92 | Small GTPase superfamily, Rab type | |
[73-233] IPR001806 | 2.9e-59 | Small GTPase superfamily | ||
[73-229] IPR005225 | 4e-31 | Small GTP-binding protein domain | ||
[73-236] IPR020849 | 3.9e-30 | Small GTPase superfamily, Ras type | ||
[74-236] IPR003578 | 1.7e-17 | Small GTPase superfamily, Rho type | ||
Orthology group | MCL13692 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202113-TA
ATGTGGAATCCTAACGCCATAGACAATCGTCAAATGGAGAAACGCATAGTGGTCGGACGGGTGAGACCCACGTGGGCGAGGAACCTCCCAGAGACGAGAGAGGATGAAGACAAAACGGAACAGGAGGCCGGAGTGATGCCTCACAGTGACCCACCATCGCCCACAGAAACATGGAACCAGACAGGGAAACAGGAAGATAAATATGATGTTTTTGGAAAGGTGATGTTGCTCGGTGACAGCGGCGTTGGAAAGACCTGCATGCTTGTCCGCTTCCGGGATGGAACTTTTCTCGCCGGCAATTACATTTCCACCGTTGGAATCGATTTCCGGAATAAGGTAGTAACAGTGGACGGAATCAAAGTTAAACTTCAGATCTGGGACACGGCAGGTCAAGAGCGCTTCCGCAGCGTCACACACGCTTATTACAGAGACGCACATGCTCTTCTCCTGCTATACGACGTCACAAACAAAACCAGCTTCGACAACATACGAGCCTGGCTCGGTGAGATCCGAGAGTACGCTCAGGACGACGTCGTCATCATGTTGTTGGGTAACAAATCGGATAGCGGCCTGGAGCGGGCGGTGAGGCGGGAGGAGGGTCAGCGTCTCGCGAGGGAATATCAAGTAGCGTTTATGGAGACATCCGCCAAAACGGGTCTCAACGTGGAAGCGGCGTTCTCGCACGTGGCGCGATCTCTTGTAGCTAAAGCGAACCCTGTAGACACATCGCGATTGGCGGTGCGCGCGCAGACTACTCAAGAACATCGCTCGACCTGTCCGCAATGCACTTAA
>DPOGS202113-PA
MWNPNAIDNRQMEKRIVVGRVRPTWARNLPETREDEDKTEQEAGVMPHSDPPSPTETWNQTGKQEDKYDVFGKVMLLGDSGVGKTCMLVRFRDGTFLAGNYISTVGIDFRNKVVTVDGIKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTSFDNIRAWLGEIREYAQDDVVIMLLGNKSDSGLERAVRREEGQRLAREYQVAFMETSAKTGLNVEAAFSHVARSLVAKANPVDTSRLAVRAQTTQEHRSTCPQCT-