| DPOGS202158 | ||
|---|---|---|
| Transcript | DPOGS202158-TA | 678 bp |
| Protein | DPOGS202158-PA | 225 aa |
| Genomic position | DPSCF300162 - 65656-66402 | |
| RNAseq coverage | 297x (Rank: top 38%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003699 | 2e-95 | 72.20% | |
| Bombyx | BGIBMGA003433-TA | 6e-71 | 58.72% | |
| Drosophila | CG6678-PA | 8e-34 | 39.32% | |
| EBI UniRef50 | UniRef50_E2AS43 | 5e-37 | 40.09% | RCC1 domain-containing protein 1 n=2 Tax=Formicidae RepID=E2AS43_CAMFO |
| NCBI RefSeq | XP_394080.2 | 2e-36 | 38.68% | PREDICTED: similar to CG6678-PA [Apis mellifera] |
| NCBI nr blastp | gi|307172226 | 2e-36 | 40.09% | RCC1 domain-containing protein 1 [Camponotus floridanus] |
| NCBI nr blastx | gi|307172226 | 2e-38 | 40.09% | RCC1 domain-containing protein 1 [Camponotus floridanus] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | bfo:BRAFLDRAFT_113678 | 9e-23 | ||
| K10615 (HERC4) | maps-> | Ubiquitin mediated proteolysis | ||
| InterPro domain | [1-219] IPR009091 | 2.2e-49 | Regulator of chromosome condensation/beta-lactamase-inhibitor protein II | |
| [53-102] IPR000408 | 2.6e-15 | Regulator of chromosome condensation, RCC1 | ||
| Orthology group | MCL13204 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202158-TA
ATGAAGGTTGTGGCAACAAATAATATTTTTATTTATTTAACGTCAGAGGGAAATGTATACACGGGTCAGCTGCCAAGTTACGTTGATACAGAACATTGTTTTGGTAAAGTGTGTGACATTGTATGTGGATATGAACATTACATGCTATTGACCGACGAGGGTAGAGTTTATACATGGGGGAACGGAAGGAGACTACAACTTGGGCACGGCGACTTGACAAACCTGGAATTACCAACAGAAGTTGAGGCTCTGGCCGGTATTAAAATTGTCAAAATAAGAGCTGGGGGCTGGCATTCGTTGGCATTAAGTGACTGCGGAGATTTATATCTCTGGGGATGGAATGACACTGGCCAATTGGGAATGGAAAATAAGGGTGGTCAAGAGAAAAAGGGTCTGAAGAACTACACACTTCCGACACTGGTTGATGTTTATGATGAAAACGATCAGCTAGTTGATCTTTGCGTTAAAGATATAGCCTGCGGTACGAGGCATACGGCACTGCTGCTAGAGGATAACACGGTGTGGACTTCAGGTTGCAATAAATATGGTCAGTTAGGGTTACCACCCGAAAGACACGAGAAGATAGAGAGTTTCAAAAAGGTGTTCTATGACGAAGGCATTACAAATATATCCTGCGGACCCTGGAGTACTGTTGTAGAATTACAGTTACAAAAATAG
>DPOGS202158-PA
MKVVATNNIFIYLTSEGNVYTGQLPSYVDTEHCFGKVCDIVCGYEHYMLLTDEGRVYTWGNGRRLQLGHGDLTNLELPTEVEALAGIKIVKIRAGGWHSLALSDCGDLYLWGWNDTGQLGMENKGGQEKKGLKNYTLPTLVDVYDENDQLVDLCVKDIACGTRHTALLLEDNTVWTSGCNKYGQLGLPPERHEKIESFKKVFYDEGITNISCGPWSTVVELQLQK-