DPOGS202201 | ||
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Transcript | DPOGS202201-TA | 576 bp |
Protein | DPOGS202201-PA | 191 aa |
Genomic position | DPSCF300149 - 256439-257369 | |
RNAseq coverage | 748x (Rank: top 17%) |
Annotation | ||||
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Heliconius | HMEL009198 | 4e-89 | 76.44% |   |
Bombyx | BGIBMGA013513-TA | 2e-76 | 76.79% |   |
Drosophila | mRpS11-PA | 5e-59 | 64.74% |   |
EBI UniRef50 | UniRef50_B4NJZ4 | 4e-58 | 60.56% | GK13384 n=9 Tax=Endopterygota RepID=B4NJZ4_DROWI |
NCBI RefSeq | XP_002073010.1 | 8e-59 | 60.56% | GK13384 [Drosophila willistoni] |
NCBI nr blastp | gi|195451635 | 1e-57 | 60.56% | GK13384 [Drosophila willistoni] |
NCBI nr blastx | gi|91087153 | 1e-56 | 59.46% | PREDICTED: similar to AGAP003644-PA [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005840 | 2.2e-69 | ribosome | |
GO:0006412 | 2.2e-69 | translation | ||
GO:0005622 | 2.2e-69 | intracellular | ||
GO:0003735 | 2.2e-69 | structural constituent of ribosome | ||
KEGG pathway | mag:amb3109 | 5e-18 |   | |
  | K02948 (RP-S11, rpsK) | maps-> | Ribosome | |
InterPro domain | [34-191] IPR001971 | 2.2e-69 | Ribosomal protein S11 | |
Orthology group | MCL14839 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202201-TA
ATGTTTACAATTCTAAGAAATACCTTAAGGCTTTCTATAAACAATCTAGTTCGACCTTTTAATACAACAACACCTACAGCTACTGAAAAATTTGACCATAAAAGAATTCCCGCAGACGACGAGGGAGTGCAGGGAGAGAAGATTGTTGATATAGATTCAGTTTTACAAACAAAACAAAATTTATTCCCAACGGCAGATTCGGATAATCTTCTTTTTGATGGTGTACCCTACAAAGACCTGGCAATATGTAACGTCAGAGTGAGTCACAACAACACCATCTTCACAATTACTGATGCTGAAGGGAAAGTTAAGCTTCTACGATCCTGTGGTATTGAAGGTTTCAAAAACACTAAAAAAGGCACCAACATCGCTGCTCAGACGACTGCTATTAATATAGCCAATAAAGCAATCGAAAAGGGATTTAGAACCATAAGAGTTCGAGTGAGAGGCCTGGGACCGGGGAGATTGTCAGCGGTCAAAGGATTACAGATGGGAGGACTTCAAATAGTCTCTGTGACAGATAATACAAGGGTGTCATGGAACCCACCGCGACCCCGCAAGGCGAAACGATTGTAG
>DPOGS202201-PA
MFTILRNTLRLSINNLVRPFNTTTPTATEKFDHKRIPADDEGVQGEKIVDIDSVLQTKQNLFPTADSDNLLFDGVPYKDLAICNVRVSHNNTIFTITDAEGKVKLLRSCGIEGFKNTKKGTNIAAQTTAINIANKAIEKGFRTIRVRVRGLGPGRLSAVKGLQMGGLQIVSVTDNTRVSWNPPRPRKAKRL-