| DPOGS202208 | ||
|---|---|---|
| Transcript | DPOGS202208-TA | 573 bp |
| Protein | DPOGS202208-PA | 190 aa |
| Genomic position | DPSCF300149 - 184607-185248 | |
| RNAseq coverage | 511x (Rank: top 24%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009216 | 8e-82 | 81.71% | |
| Bombyx | BGIBMGA013503-TA | 2e-77 | 77.54% | |
| Drosophila | CG32708-PA | 1e-41 | 52.00% | |
| EBI UniRef50 | UniRef50_Q1HDZ9 | 5e-75 | 76.72% | CG10993-like protein n=1 Tax=Bombyx mori RepID=Q1HDZ9_BOMMO |
| NCBI RefSeq | NP_001037600.1 | 1e-75 | 76.72% | CG10993-like protein [Bombyx mori] |
| NCBI nr blastp | gi|112983154 | 2e-74 | 76.72% | CG10993-like protein [Bombyx mori] |
| NCBI nr blastx | gi|112983154 | 6e-78 | 76.72% | CG10993-like protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0000166 | 6.1e-09 | nucleotide binding | |
| GO:0003676 | 1.9e-06 | nucleic acid binding | ||
| KEGG pathway | ||||
| InterPro domain | [24-118] IPR012677 | 6.1e-09 | Nucleotide-binding, alpha-beta plait | |
| [43-117] IPR000504 | 1.9e-06 | RNA recognition motif domain | ||
| Orthology group | MCL15235 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202208-TA
ATGCCATCGCTTGACATGGAGAGAGTTCCGGAAAATGGTTCAGATTGTGAAACAGCGGATCAAAGTGAGGAAGAATCACAACCTAAAAAAGTGGTAAATAAGAAAAAGCCTAAGAAACGCGGAATTATTTACCTATCTACCATTCCACCTTATATGAATGTTGCAAAAATTAGAGAAATATTTAGTCAATTCGGTGATGTCGGAAGGATATATTTACAATCAAGTGCAAAACCAGGAGAGAAAAGAAAACGCGTACCAAATCTTTTCACAGAGGGTTGGGTAGAATTTGAAAAGAAGAGAATTGCTAAAAGCGTGGCTGCAAACTTAAATAACACAAAAATTGGAACGAGAAAGAGATCGCGTTATTATGATATGATATGGAATATTAAATATATTCCTAGGTTTAAATGGATCCATCTAAGTGAAAGACTGGCCTATGAGAGAGCAGCTATGAAACAAAGACTCCGAGCTGAAATATCACAGGCTAAGAAAGAAGCTAATTATTTGCAGAATAACATTGAAAAAAGTAAAAAGATAAAGAAGTTCAAAGCCATGGAGAAAGAAAGCGCTTAA
>DPOGS202208-PA
MPSLDMERVPENGSDCETADQSEEESQPKKVVNKKKPKKRGIIYLSTIPPYMNVAKIREIFSQFGDVGRIYLQSSAKPGEKRKRVPNLFTEGWVEFEKKRIAKSVAANLNNTKIGTRKRSRYYDMIWNIKYIPRFKWIHLSERLAYERAAMKQRLRAEISQAKKEANYLQNNIEKSKKIKKFKAMEKESA-