| DPOGS202286 | ||
|---|---|---|
| Transcript | DPOGS202286-TA | 531 bp |
| Protein | DPOGS202286-PA | 176 aa |
| Genomic position | DPSCF300032 - 163603-164307 | |
| RNAseq coverage | 57x (Rank: top 69%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005840 | 2e-69 | 69.41% | |
| Bombyx | BGIBMGA004942-TA | 8e-64 | 66.25% | |
| Drosophila | ATPsyn-d-PB | 5e-43 | 47.31% | |
| EBI UniRef50 | UniRef50_Q24251 | 5e-41 | 47.31% | ATP synthase subunit d, mitochondrial n=27 Tax=Pancrustacea RepID=ATP5H_DROME |
| NCBI RefSeq | NP_001093279.1 | 3e-45 | 51.19% | H+ transporting ATP synthase subunit d [Bombyx mori] |
| NCBI nr blastp | gi|153791739 | 5e-44 | 51.19% | H+ transporting ATP synthase subunit d [Bombyx mori] |
| NCBI nr blastx | gi|153791739 | 4e-46 | 50.29% | H+ transporting ATP synthase subunit d [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0015986 | 1.1e-52 | ATP synthesis coupled proton transport | |
| GO:0000276 | 1.1e-52 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | ||
| GO:0015078 | 1.1e-52 | hydrogen ion transmembrane transporter activity | ||
| KEGG pathway | dmo:Dmoj_GI10758 | 1e-42 | ||
| K02138 (ATPeFD, ATP5H) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [1-177] IPR008689 | 1.1e-52 | ATPase, F0 complex, subunit D, mitochondrial | |
| Orthology group | MCL25085 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202286-TA
ATGGCTAAAAGATTTACAAAGCCTACAATCAATTGGGTTGAATTCGAGAAAAGAGTGCCACCTGAACAGAAAGCTAAGTTTTTGGCTTTTAAGGCAAAAGCGGATGTTTATTTGAGACGGGTGCAAGCTAATCCACCTGAACCACCAAAAATCGATTGGGACATGTATCAAAAAATTGTACCAGTGTCAGGGCTCGTGGATAATTTCAAAACTGCGTACCAACAACTAAAAATACCATACCCAGCCGACTGTCTTTCGACTAAAGTTGACGAACAATGGAAAACATTGGAACCAGAGATAAAGAAATATTGCGATGAAATGCAAAAAGATATTGACGTAGCGAAAAAAGAGTTGAATAGATTAAACGCTCTGCCAAAGGTGGAGGACATTACGTTAGAGATGTATTACGATTTGTATCCGAATGATGCTTTGGACCCTATTAACCGTCCAACAATGTGGCCTCACACTCCCGAGGAGCAGTTAGATTACAAGCCACCCGAAAAGAAAGTAGAAGACCAAAAGAAAAAGTAG
>DPOGS202286-PA
MAKRFTKPTINWVEFEKRVPPEQKAKFLAFKAKADVYLRRVQANPPEPPKIDWDMYQKIVPVSGLVDNFKTAYQQLKIPYPADCLSTKVDEQWKTLEPEIKKYCDEMQKDIDVAKKELNRLNALPKVEDITLEMYYDLYPNDALDPINRPTMWPHTPEEQLDYKPPEKKVEDQKKK-