| DPOGS202311 | ||
|---|---|---|
| Transcript | DPOGS202311-TA | 471 bp |
| Protein | DPOGS202311-PA | 156 aa |
| Genomic position | DPSCF300032 + 365380-365940 | |
| RNAseq coverage | 365x (Rank: top 32%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007632 | 3e-59 | 81.76% | |
| Bombyx | BGIBMGA004983-TA | 9e-45 | 64.38% | |
| Drosophila | CG13516-PA | 1e-07 | 37.50% | |
| EBI UniRef50 | UniRef50_A7UV77 | 1e-06 | 30.20% | AGAP009051-PA n=6 Tax=Endopterygota RepID=A7UV77_ANOGA |
| NCBI RefSeq | XP_001689211.1 | 3e-07 | 30.20% | AGAP009051-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastp | gi|158299770 | 5e-06 | 30.20% | AGAP009051-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastx | gi|326929310 | 1e-12 | 32.70% | PREDICTED: LITAF-like protein-like [Meleagris gallopavo] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [95-156] IPR006629 | 4.8e-13 | LPS-induced tumor necrosis factor alpha factor | |
| Orthology group | MCL25087 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202311-TA
ATGGCGACGAGTATTCCAAATACCTCGAATATTCCACCTCCAAACCCCAACGATCTTCCACCACCTTATTCTGCAGTCGTGGGTAATCCTCAGTACGGCTTTGTGGTCCCGGGTGGACCAGTTTCGCCTGCCGATGGTGTTTACACACAGCCTAAACAATTTACTGCTACGGGAGTGTACCCTCACCCTGTGACGACTGCTCAGCCCCAACCTGGAGATGTTCCACCGCCTCCGCCTGGTATGAGCGTGCCTATTGGGGTGGTGATGCCGCCCGCGGTTGGCAGCGAGCCCACAACTGTAACCTGTTATAATTGCGGAAAAGTTGTAACAACCAGAGTCACGTACACAACAGCCTGGCACACGCACCTCGTAGCTGGATCTATTTGTGTTATAACAATGGTTTGTTCACTATGCTGCCTCGGACTGGTTCCGTACTGTTTCGATACATTCAAAGATGCCGAGCACTACTGA
>DPOGS202311-PA
MATSIPNTSNIPPPNPNDLPPPYSAVVGNPQYGFVVPGGPVSPADGVYTQPKQFTATGVYPHPVTTAQPQPGDVPPPPPGMSVPIGVVMPPAVGSEPTTVTCYNCGKVVTTRVTYTTAWHTHLVAGSICVITMVCSLCCLGLVPYCFDTFKDAEHY-