| DPOGS202343 | ||
|---|---|---|
| Transcript | DPOGS202343-TA | 597 bp |
| Protein | DPOGS202343-PA | 198 aa |
| Genomic position | DPSCF300032 + 917873-919178 | |
| RNAseq coverage | 338x (Rank: top 34%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002107 | 3e-85 | 73.74% | |
| Bombyx | BGIBMGA004839-TA | 3e-80 | 72.36% | |
| Drosophila | mRpL40-PA | 1e-41 | 49.50% | |
| EBI UniRef50 | UniRef50_Q170X2 | 2e-48 | 52.15% | Mitochondrial ribosomal protein, L40, putative n=1 Tax=Aedes aegypti RepID=Q170X2_AEDAE |
| NCBI RefSeq | XP_001658631.1 | 3e-49 | 52.15% | mitochondrial ribosomal protein, L40, putative [Aedes aegypti] |
| NCBI nr blastp | gi|332374776 | 5e-48 | 49.49% | unknown [Dendroctonus ponderosae] |
| NCBI nr blastx | gi|157116778 | 5e-48 | 52.15% | mitochondrial ribosomal protein, L40, putative [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [38-196] IPR019192 | 3.9e-49 | Ribosomal protein L28/L40, mitochondrial | |
| Orthology group | MCL13495 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202343-TA
ATGTTGAAACAATTTTCACGTTTAGCAATAAATTCGGTTGCTAAAGCAACAGTTAATGCCAGAAATATTAATACGTCTGCAGTTGTTCAGATTAGGATAACCGATCAATTATGGGCAGAACCTATGAAAAAGAAGAAGAAAATGGATCCCGCCATAATAAAAGCGCGTGAAGAAAGGCGTCGTAAAAAGTTAGAGAAAAATATTCGAAGGCTAGAAAAAAATGCAAGACAGTTAAAACCAATTGATGAGTTAGAACCTCCACTACATCTTACCGACTCTCTAGGAAAACGTAAAAGACAAGTTCAAGTGACTCCTGAGCAACAAGAGGCGAGAGATGTTTTACTAAAAGAATGGACCCGTTACAAGAAACAGGAGTACATGGCTAATGTAGCCCAGATTGATAGAATCATGGCATCACAAAGACGAGCACTAGACAAATTGTATGAAGAGAGTGAAGATTTGTATAATGAAGCAATAATGCCTGATCTGAGTTTGGTGCCATACTCCATCTCAGGACCTTATGCAACACCGCCCATTAAGAATTATGAGTCGCCCGACGGTGAATACACAGATATATCCAAGAATTGGGGAAATTAG
>DPOGS202343-PA
MLKQFSRLAINSVAKATVNARNINTSAVVQIRITDQLWAEPMKKKKKMDPAIIKAREERRRKKLEKNIRRLEKNARQLKPIDELEPPLHLTDSLGKRKRQVQVTPEQQEARDVLLKEWTRYKKQEYMANVAQIDRIMASQRRALDKLYEESEDLYNEAIMPDLSLVPYSISGPYATPPIKNYESPDGEYTDISKNWGN-