| DPOGS202407 | ||
|---|---|---|
| Transcript | DPOGS202407-TA | 270 bp |
| Protein | DPOGS202407-PA | 89 aa |
| Genomic position | DPSCF300233 - 80399-81281 | |
| RNAseq coverage | 9580x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006281 | 1e-38 | 77.53% | |
| Bombyx | BGIBMGA003301-TA | 1e-37 | 76.40% | |
| Drosophila | CG15434-PA | 4e-19 | 48.24% | |
| EBI UniRef50 | UniRef50_G6CYJ4 | 3e-46 | 100.00% | NADH dehydrogenase n=2 Tax=Bilateria RepID=G6CYJ4_DANPL |
| NCBI RefSeq | NP_001040303.1 | 6e-36 | 76.40% | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Bombyx mori] |
| NCBI nr blastp | gi|114051495 | 2e-34 | 76.40% | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Bombyx mori] |
| NCBI nr blastx | gi|114051495 | 1e-32 | 76.40% | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | cqu:CpipJ_CPIJ010610 | 2e-27 | ||
| K03946 (NDUFA2) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [1-90] IPR016464 | 1.8e-50 | NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 | |
| [18-90] IPR007741 | 1.5e-28 | Ribosomal protein/NADH dehydrogenase domain | ||
| [8-89] IPR012336 | 1.6e-25 | Thioredoxin-like fold | ||
| Orthology group | MCL12277 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202407-TA
ATGGCCGTTCGTTTCGCCGGTGCTCTGAAAGAGCTTAGAATTCACTTATGTCAAACTAACCAACAATCTGCTGGTGTTAGAGACTTCATCCAAAAATACTATGTTGGTTTAAAAAAAGAAAATCCCAAGTTTCCTATACTGATCCGCGAGTGCAGCGGTGTTCAACCCCGTGTCTGGGCTCGCTATGACCGAGGTTCTGAAAAGAGTGCATCTTTGACAAACCTATCTTCAAATGATGTACTATCCACCATTAAGCAACTAGTGAAGTGA
>DPOGS202407-PA
MAVRFAGALKELRIHLCQTNQQSAGVRDFIQKYYVGLKKENPKFPILIRECSGVQPRVWARYDRGSEKSASLTNLSSNDVLSTIKQLVK-