| DPOGS202451 | ||
|---|---|---|
| Transcript | DPOGS202451-TA | 690 bp |
| Protein | DPOGS202451-PA | 229 aa |
| Genomic position | DPSCF300174 - 186180-193512 | |
| RNAseq coverage | 2670x (Rank: top 5%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010125 | 4e-84 | 77.27% | |
| Bombyx | BGIBMGA009974-TA | 2e-68 | 84.46% | |
| Drosophila | Nc73EF-PI | 4e-35 | 45.50% | |
| EBI UniRef50 | UniRef50_E2AHW4 | 4e-40 | 51.69% | 2-oxoglutarate dehydrogenase E1 component, mitochondrial n=1 Tax=Camponotus floridanus RepID=E2AHW4_CAMFO |
| NCBI RefSeq | XP_391838.2 | 2e-47 | 53.09% | PREDICTED: similar to Neural conserved at 73EF CG11661-PF, isoform F isoform 1 [Apis mellifera] |
| NCBI nr blastp | gi|328786455 | 3e-46 | 53.09% | PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 1 [Apis mellifera] |
| NCBI nr blastx | gi|242024794 | 9e-45 | 56.73% | 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006096 | 5.6e-43 | glycolysis | |
| GO:0004591 | 5.6e-43 | oxoglutarate dehydrogenase (succinyl-transferring) activity | ||
| GO:0055114 | 5.6e-43 | oxidation-reduction process | ||
| GO:0030976 | 5.6e-43 | thiamine pyrophosphate binding | ||
| KEGG pathway | ame:408286 | 4e-47 | ||
| K00164 (OGDH, sucA) | maps-> | Citrate cycle (TCA cycle) | ||
| Tryptophan metabolism | ||||
| Lysine degradation | ||||
| InterPro domain | [22-160] IPR011603 | 5.6e-43 | 2-oxoglutarate dehydrogenase, E1 component | |
| Orthology group | MCL34447 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202451-TA
ATGCATCGTGCAAAGTTAGTGCTTCAGGCTACAAATAAAATCGGCAACAGTGAAAGATTTGCATCATGGCTCCTCAACAAACCCCAGACGGCGGCCGTGATGGTGAACAACCAAAGGCTGAAGAGTTCAACGGCAGCAGAGCCTTTCTTGAACGGTTCAAGTTCAGCATATGTGGAGACTATGTACAATGCCTGGCTGTCAGATCCTAACTCGGTGCATGCGTCTTGGGACGCGTTCTTCCGCAACGCCACAAATGGCGCCCAGCCCGGGGTCGCATACACGTCTCCACCGAATCTAGCCCCGTACTCCAAGAACGAAGTCCCCTTGACCTCCCTGGTACCAGCGGCTGGCATGCCCTCGATATCAGCAGGTTCACCCATCAACGAGAAAATCATCGACGACCATCTGGCGGTGCAGGCTATCATCAGAAGCTACCAGGCTCGAGGTCACCTGGCGGCGGATGTGGACCCGCTCGGCATCACCACGGCCAACCTGCCCGCCCTCGGCATGCGCGCGCCACGCTCGGAGCTCATCATGAGGAAATATTTCAATTTCGGTACGATTGGAAACAATCGCCAGGACGAAAGATCCGTTGGCGGAACTATTGGCCAGCTTGGCCCGACGTGTGGCCGTGGTTACGACACACTCGCCCCACGTCGGGCGCCACTATCGAATAGTTTCGCCAGCTGA
>DPOGS202451-PA
MHRAKLVLQATNKIGNSERFASWLLNKPQTAAVMVNNQRLKSSTAAEPFLNGSSSAYVETMYNAWLSDPNSVHASWDAFFRNATNGAQPGVAYTSPPNLAPYSKNEVPLTSLVPAAGMPSISAGSPINEKIIDDHLAVQAIIRSYQARGHLAADVDPLGITTANLPALGMRAPRSELIMRKYFNFGTIGNNRQDERSVGGTIGQLGPTCGRGYDTLAPRRAPLSNSFAS-