| DPOGS202709 | ||
|---|---|---|
| Transcript | DPOGS202709-TA | 501 bp |
| Protein | DPOGS202709-PA | 166 aa |
| Genomic position | DPSCF300272 - 111165-112300 | |
| RNAseq coverage | 248x (Rank: top 42%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016568 | 3e-46 | 56.33% | |
| Bombyx | BGIBMGA000944-TA | 2e-35 | 45.71% | |
| Drosophila | CG14207-PB | 3e-32 | 40.33% | |
| EBI UniRef50 | UniRef50_Q8IQW5 | 3e-30 | 40.33% | CG14207, isoform B n=18 Tax=Pancrustacea RepID=Q8IQW5_DROME |
| NCBI RefSeq | XP_001607675.1 | 9e-35 | 46.84% | PREDICTED: similar to heat shock protein 20.6 isoform 2 [Nasonia vitripennis] |
| NCBI nr blastp | gi|289740239 | 1e-33 | 46.30% | HspB1 [Glossina morsitans morsitans] |
| NCBI nr blastx | gi|289740239 | 1e-32 | 46.30% | HspB1 [Glossina morsitans morsitans] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | bfo:BRAFLDRAFT_130908 | 6e-13 | ||
| K09542 (CRYAB) | maps-> | Protein processing in endoplasmic reticulum | ||
| InterPro domain | [84-159] IPR002068 | 2.6e-16 | Heat shock protein Hsp20 | |
| [63-156] IPR008978 | 3.7e-14 | HSP20-like chaperone | ||
| [78-98] IPR001436 | 1.2e-06 | Alpha crystallin/Heat shock protein | ||
| Orthology group | MCL34459 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202709-TA
ATGTCCGAAAACCAGATCCAAATTCCCGTAGAGCTGACGGAGACACTGGTCTTCGATGACGCCTTCACATCCATGAAGGAACGGTTCGTGGCCGAGATGAAGAGGATCGATGAGGCCATGGTCAAGTTCAGCAATAGGTTCCTCCAATCCCAGGCAGCGCGGATCGACAGCAACACGTCATCCCCCGACCCTCACGCAGACCTCCTCACCAACTCCCCGCTGGTGGAAGGCGAGGGGGAGAATAAAATACTCAAATTACAGTTCGATGTCAGCCAATTCAACCCTGAAGAAGTGACAGTGAGTATGCTACAAAACAAGCTGATGATATCCGCCGCCCACAAGGAGAGTACCGACACCAGCACCAGCCTCCGGGAGTACAGGAGGGAGTTCTACTTCCCCCAGGGTGTGGACCCCGCGAACATCACCTCGTCACTCTCCAAGGACGGGGTGCTCATAGTACAGGCACCGCTGGCGATAACCGATAACACGACTCCCAAATAA
>DPOGS202709-PA
MSENQIQIPVELTETLVFDDAFTSMKERFVAEMKRIDEAMVKFSNRFLQSQAARIDSNTSSPDPHADLLTNSPLVEGEGENKILKLQFDVSQFNPEEVTVSMLQNKLMISAAHKESTDTSTSLREYRREFYFPQGVDPANITSSLSKDGVLIVQAPLAITDNTTPK-