| DPOGS202726 | ||
|---|---|---|
| Transcript | DPOGS202726-TA | 204 bp |
| Protein | DPOGS202726-PA | 67 aa |
| Genomic position | DPSCF303751 + 51-359 | |
| RNAseq coverage | 904x (Rank: top 14%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015169 | 8e-33 | 100.00% | |
| Bombyx | BGIBMGA007516-TA | 3e-32 | 98.51% | |
| Drosophila | Ef1alpha48D-PB | 1e-26 | 80.60% | |
| EBI UniRef50 | UniRef50_P08736 | 2e-24 | 80.60% | Elongation factor 1-alpha 1 n=5691 Tax=root RepID=EF1A1_DROME |
| NCBI RefSeq | XP_001361821.2 | 6e-26 | 83.58% | GA20951 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastp | gi|110456552 | 2e-25 | 83.58% | putative elongation factor 1-alpha, partial [Diaphorina citri] |
| NCBI nr blastx | gi|305377014 | 3e-26 | 91.04% | elongation factor 1 alpha [Gryllus bimaculatus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005525 | 3.3e-12 | GTP binding | |
| KEGG pathway | ||||
| InterPro domain | [1-48] IPR009001 | 4.4e-14 | Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal | |
| [1-46] IPR004160 | 3.3e-12 | Translation elongation factor EFTu/EF1A, C-terminal | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202726-TA
TCCGGCGACGCGGCCATCGTCACCCTGGTGCCGACCAAGGCGCTGTGTGTGGAGTCGTTCCAGGAGTTCCCGCCGCTGGGACGCTTCGCCGTCCGGGACATGCGTCAGACGGTTGCCGTTGGAGTCATCAAGAGCGTGACCTTCAAGGAGGTGACTACGGGCAAAATCACCAAGGCCGCCGAGAAGGCCCAGAAGAAAAAATAA
>DPOGS202726-PA
SGDAAIVTLVPTKALCVESFQEFPPLGRFAVRDMRQTVAVGVIKSVTFKEVTTGKITKAAEKAQKKK-