DPOGS202844 | ||
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Transcript | DPOGS202844-TA | 723 bp |
Protein | DPOGS202844-PA | 240 aa |
Genomic position | DPSCF300018 + 1007519-1008487 | |
RNAseq coverage | 1009x (Rank: top 13%) |
Annotation | ||||
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Heliconius | HMEL009301 | 3e-73 | 60.83% |   |
Bombyx | BGIBMGA010485-TA | 4e-104 | 77.50% |   |
Drosophila | aph-1-PA | 4e-68 | 54.27% |   |
EBI UniRef50 | UniRef50_Q9VQG2 | 5e-66 | 54.27% | Gamma-secretase subunit Aph-1 n=15 Tax=Endopterygota RepID=APH1_DROME |
NCBI RefSeq | XP_392345.2 | 7e-72 | 56.96% | PREDICTED: similar to anterior pharynx defective 1 CG2855-PA [Apis mellifera] |
NCBI nr blastp | gi|380011221 | 6e-72 | 56.36% | PREDICTED: gamma-secretase subunit Aph-1-like [Apis florea] |
NCBI nr blastx | gi|380011221 | 6e-76 | 56.36% | PREDICTED: gamma-secretase subunit Aph-1-like [Apis florea] |
Group | ||||
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Gene Ontology | GO:0016485 | 8.9e-93 | protein processing | |
GO:0016021 | 8.9e-93 | integral to membrane | ||
GO:0043085 | 8.9e-93 | positive regulation of catalytic activity | ||
KEGG pathway | ame:408814 | 2e-71 |   | |
  | K06172 (APH1) | maps-> | Alzheimer's disease | |
  |   |   | Notch signaling pathway | |
InterPro domain | [2-229] IPR009294 | 8.9e-93 | Aph-1 | |
Orthology group | MCL11051 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202844-TA
ATGACTGCCGCAGAGTTTTTCAGTTGTTCTCTTCTAGCCTTCGGAGCGCCTTTGGCTATGTTCGCTTTAACGATAGCCAACGACCCTGTGCGGATCATAATCATGATAGCTGCCGCGTTTTTTTGGCTGCTATCATTTCTACTGTCTTCGATGCTGTGGTACGCCGTGGTACCCCTACGGTCCTATTTAGCTTTTGGAATGGTTTTCGCGATATTAATCCAGGAGACTTTTCGCTTTGGTGTGTATCTTCTATTGAAAAGGACTGAATCAGGATTGAAGGAAATATCAGAAAACCATGAGATTGGTAGTAATAAGGCTGAGATTGCTTATGTGTCAGGCTTTGGGTTCGGAGCCATGAGTGGGGCATTTGCAATCATTAATGTGTTGGCAGATTCTATTGGTCCTGGAACGTTAGGACTTCGTCATGGAACGGAATACTTCTTTGTTACGAGTGCGTCTATGACTCTCTGCATGACGCTGCTCAACACATTTTGGACCGTCATCTTCTTTAATGGACTGGACAATAAGAGCTACTTGAAGATCCTGTGGGTGATCGGCTCACATTTTCTAGTGTCCGGATTGAGTTTACTCAATAGGAAAGAACTGTATGTGGCTACAATAATCCCATCATACATAATTCTTGTAATAACTCTATATATATCATTCAAGTGCGCCGGCGGTTCTAGTAAAGGTTTTCTGCAGACATTCCGGGCTAGAACTTAA
>DPOGS202844-PA
MTAAEFFSCSLLAFGAPLAMFALTIANDPVRIIIMIAAAFFWLLSFLLSSMLWYAVVPLRSYLAFGMVFAILIQETFRFGVYLLLKRTESGLKEISENHEIGSNKAEIAYVSGFGFGAMSGAFAIINVLADSIGPGTLGLRHGTEYFFVTSASMTLCMTLLNTFWTVIFFNGLDNKSYLKILWVIGSHFLVSGLSLLNRKELYVATIIPSYIILVITLYISFKCAGGSSKGFLQTFRART-