MonarchBase - Protein-coding gene

Monarch geneset OGS2.0

DPOGS202970
Transcript	DPOGS202970-TA	399 bp
Protein	DPOGS202970-PA	132 aa
Genomic position	DPSCF300259 - 168310-168801
RNAseq coverage	11x (Rank: top 83%)

Annotation
*Heliconius*	HMEL006029	4e-33	65.62%
*Bombyx*	BGIBMGA005191-TA	2e-42	60.83%
*Drosophila*	Mdh2-PA	2e-06	41.43%
EBI UniRef50	UniRef50_E0VRQ6	2e-08	32.81%	Malate dehydrogenase, putative n=1 Tax=Pediculus humanus corporis RepID=E0VRQ6_PEDHC
NCBI RefSeq	XP_002428800.1	3e-09	32.81%	malate dehydrogenase, putative [Pediculus humanus corporis]
NCBI nr blastp	gi\|242016382	7e-08	32.81%	malate dehydrogenase, putative [Pediculus humanus corporis]
NCBI nr blastx	gi\|242016382	2e-07	32.81%	malate dehydrogenase, putative [Pediculus humanus corporis]

Group
Gene Ontology	GO:0055114	4e-09	oxidation-reduction process
	GO:0016491	4e-09	oxidoreductase activity
	GO:0005488	5.2e-09	binding
KEGG pathway	pop:POPTR_822907	5e-07
	K00026 (MDH2)	maps->	Citrate cycle (TCA cycle)
			Pyruvate metabolism
			Carbon fixation in photosynthetic organisms
			Glyoxylate and dicarboxylate metabolism
InterPro domain	[51-112] IPR001236	4e-09	Lactate/malate dehydrogenase, N-terminal
	[51-117] IPR016040	5.2e-09	NAD(P)-binding domain
Orthology group	MCL30314		Lepidoptera specific

Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS202970-TA
ATGTTCCGACAAATGACGCTCCTCCTGAGATCAAACAATGTCTCATCGCAAACTATAGCTAAATACCAGAATTATGTAATGTCCGAGGCTTTGGCGCATCTCGAACGGGAATGTGAGAAATACTGTCCAGTCCCAAGATTTCCACCTAAAAAAGTGACCGTTGTCGGCGCTGGTAGCGACGTCGGCTGTGTTGCCTCACTGTTCCTTAAACAGGAAAAGCTTATAAAGACACTGGCTTTATATGATGATGACCCAAATAACAAAGTACTTGGCATGGCTACCGACGTGGCTCACATAGACACCAGCACAGAGGTAGAAGCGTATCAAGGAAGAGCCTACCTAAAGACAGCCCTATGGGTACTGAAATATAAAATAATAATATTACACTACGAGAATTAA

Protein sequence:

>DPOGS202970-PA
MFRQMTLLLRSNNVSSQTIAKYQNYVMSEALAHLERECEKYCPVPRFPPKKVTVVGAGSDVGCVASLFLKQEKLIKTLALYDDDPNNKVLGMATDVAHIDTSTEVEAYQGRAYLKTALWVLKYKIIILHYEN-