| DPOGS203024 | ||
|---|---|---|
| Transcript | DPOGS203024-TA | 453 bp |
| Protein | DPOGS203024-PA | 150 aa |
| Genomic position | DPSCF300068 + 497424-501947 | |
| RNAseq coverage | 196x (Rank: top 47%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011045 | 7e-41 | 55.33% | |
| Bombyx | BGIBMGA012262-TA | 2e-33 | 51.08% | |
| Drosophila | Snmp2-PC | 5e-22 | 37.40% | |
| EBI UniRef50 | UniRef50_D6WGA2 | 3e-22 | 41.43% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WGA2_TRICA |
| NCBI RefSeq | XP_002008105.1 | 4e-23 | 37.40% | GI13314 [Drosophila mojavensis] |
| NCBI nr blastp | gi|195127297 | 8e-22 | 37.40% | GI13314 [Drosophila mojavensis] |
| NCBI nr blastx | gi|91092044 | 9e-21 | 41.73% | PREDICTED: similar to scavenger receptor class B (AGAP005716-PA) [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016020 | 8.1e-31 | membrane | |
| GO:0007155 | 8.1e-31 | cell adhesion | ||
| KEGG pathway | mdo:100029588 | 1e-09 | ||
| K13885 (SCARB1) | maps-> | Phagosome | ||
| InterPro domain | [12-138] IPR002159 | 8.1e-31 | CD36 antigen | |
| Orthology group | MCL30916 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203024-TA
ATGTGTAACTTTGCTTGCGGAATGGTGAGCTTGTTGGGGGGGCTGGTGCTGGTGGCAGTCAGCTCGTTCGTAGCCTTCGGAGTAGTCCCGGGAATCATAGACGGTGTCATAGAGAGTGAGGTGGTGCTCATAAATGAAACGGAACAGTTTGATCGCTTCGAGGAGGTTCCCTTCCCGCTCACCTTCAACGTCCGACTGTTCAATGTGAGCAATGCTGACGTGGTACTCAACGGCGGAGTCCCCGTCGTCACCGAAGTCGGCCCGTATGTTTACAAACTTACTCAGACACGTGAGATCGAGGAAATGGGTGAAGACAGCATCACTTACCGCCGACGAGACCAGTTTGAGTTCGACCCTGAGGCTTCCTATCCCCTGACTGAAGACGACCGGGTCACCATCGCGAACGTAGCCTTCCACGAGCCGGGCGGCCGCGGCGATCGATCCAGCCCGTAG
>DPOGS203024-PA
MCNFACGMVSLLGGLVLVAVSSFVAFGVVPGIIDGVIESEVVLINETEQFDRFEEVPFPLTFNVRLFNVSNADVVLNGGVPVVTEVGPYVYKLTQTREIEEMGEDSITYRRRDQFEFDPEASYPLTEDDRVTIANVAFHEPGGRGDRSSP-