| DPOGS203061 | ||
|---|---|---|
| Transcript | DPOGS203061-TA | 444 bp |
| Protein | DPOGS203061-PA | 147 aa |
| Genomic position | DPSCF300392 + 18-888 | |
| RNAseq coverage | 765x (Rank: top 17%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005392 | 2e-43 | 57.93% | |
| Bombyx | BGIBMGA001829-TA | 3e-18 | 49.44% | |
| Drosophila | CG6833-PB | 4e-27 | 42.48% | |
| EBI UniRef50 | UniRef50_UPI00015B42FE | 4e-28 | 45.95% | UPI00015B42FE related cluster n=1 Tax=unknown RepID=UPI00015B42FE |
| NCBI RefSeq | XP_002008924.1 | 2e-30 | 45.58% | GI13758 [Drosophila mojavensis] |
| NCBI nr blastp | gi|302758770 | 5e-31 | 45.14% | hypothetical protein SELMODRAFT_79010 [Selaginella moellendorffii] |
| NCBI nr blastx | gi|302758770 | 2e-29 | 45.14% | hypothetical protein SELMODRAFT_79010 [Selaginella moellendorffii] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 6.4e-23 | nucleic acid binding | |
| GO:0004527 | 3.5e-17 | exonuclease activity | ||
| GO:0005622 | 3.5e-17 | intracellular | ||
| KEGG pathway | ||||
| InterPro domain | [4-147] IPR012337 | 6.4e-23 | Ribonuclease H-like | |
| [11-140] IPR013520 | 1.1e-17 | Exonuclease, RNase T/DNA polymerase III | ||
| [1-148] IPR006055 | 3.5e-17 | Exonuclease | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203061-TA
ATGGTGGCGTCGGGCAACCGAAGTTTGCTGGCCAAGGTGTCAGTAGTGGACGAATATTGCGATGTTCTCCTAAACTGCTACGTTAAACCTACGGCCATCGTCACAGACTACAGGACTGGCTTGCACGGGATTGACAAGCATGACCTGGAAACGGGGCGGCCCTTCGACAGCGTACGAGGAGAAGTTGCCAATTTGTTGAGTGGTAAAATCCTAGTGGGGCATTCGTTACACTTCGATCTTCAAGCTCTAAATTTGTCTCATCCGGAAAACGACACGCGAGATTTCGCCAAAAATCCCAGGTTTATGAAGAACGGTCAGCCCCGGGCTCTGAAGGACCTCGCTCGTGAGTTTCTCCAGAAGAGTATTCAGGTGAATTTCCACGATTCTTTGGAAGATGCTAGGACATGCATGCAGCTGTACAAGAGGGTCGCCAGCCAGTGGTAG
>DPOGS203061-PA
MVASGNRSLLAKVSVVDEYCDVLLNCYVKPTAIVTDYRTGLHGIDKHDLETGRPFDSVRGEVANLLSGKILVGHSLHFDLQALNLSHPENDTRDFAKNPRFMKNGQPRALKDLAREFLQKSIQVNFHDSLEDARTCMQLYKRVASQW-