| DPOGS203316 | ||
|---|---|---|
| Transcript | DPOGS203316-TA | 672 bp |
| Protein | DPOGS203316-PA | 223 aa |
| Genomic position | DPSCF300003 - 926415-929000 | |
| RNAseq coverage | 494x (Rank: top 25%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016629 | 4e-84 | 68.47% | |
| Bombyx | BGIBMGA012304-TA | 2e-109 | 80.72% | |
| Drosophila | Prx6005-PA | 2e-75 | 59.55% | |
| EBI UniRef50 | UniRef50_P30041 | 4e-76 | 62.27% | Peroxiredoxin-6 n=473 Tax=root RepID=PRDX6_HUMAN |
| NCBI RefSeq | NP_001040104.1 | 7e-106 | 79.37% | glutathione peroxidase [Bombyx mori] |
| NCBI nr blastp | gi|157313403 | 1e-106 | 80.72% | 1-Cys peroxiredoxin [Bombyx mori] |
| NCBI nr blastx | gi|157313403 | 3e-107 | 80.72% | 1-Cys peroxiredoxin [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016209 | 3.5e-30 | antioxidant activity | |
| GO:0055114 | 3.5e-30 | oxidation-reduction process | ||
| GO:0016491 | 3.5e-30 | oxidoreductase activity | ||
| GO:0051920 | 6e-12 | peroxiredoxin activity | ||
| KEGG pathway | tca:659242 | 3e-83 | ||
| K11188 (PRDX6) | maps-> | Phenylpropanoid biosynthesis | ||
| Phenylalanine metabolism | ||||
| Methane metabolism | ||||
| InterPro domain | [1-220] IPR012336 | 1.5e-69 | Thioredoxin-like fold | |
| [5-139] IPR000866 | 3.5e-30 | Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant | ||
| [163-197] IPR019479 | 6e-12 | Peroxiredoxin, C-terminal | ||
| Orthology group | MCL14111 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS203316-TA
ATGCTGTTTCTTGGTGATGTTTTTCCAAATTTCACAGCAAATACTACTGCAGGTGAAATAAATTTTCATGAATGGCTTGGTTCCTCTTGGGGTATCCTGTTCTCTCATCCATCTGATTTCACACCGGTCTGCACTACTGAACTGGCGAAATTACTTAATCTGCTTCCAGAGTTTGAAAAGCGGAATGTCAAGGTTATTGGCTTGTCTTGTGATTCGATTTCCTCTCATATAGAGTGGTGCAAAGATATCAAAAGCTATGCAGGCTGTAACGAAGATGAGAAGTTTCCGTACCCTATAATAGAGGATCAGGACAGAAGTCTAGCTAAGAGCCTGGGAATGGTTGATAAAGATGAATTAGACCAAAAAGGCCTGCCGCTGACTGCCAGGGCTGTATTCATTATAGATGTGAACAAGAAATTCCGTCTGTCGTTATTGTATCCTGCAACCACAGGAAGAAACTTTGATGAGATTCTCCGCGTGATAGATTCGCTGCAGCTCACTGATAAGGCTAAAGTGGCGACGCCGGTCAATTGGAAGATGGGCGATGACTGCATGGTGTTGCCAACAATACCCCAAGATCAGGTCACCAAGTTTTTCCCAAGAGGTGTCACTGTGGTGCCCCTGCCTTCGGGCAAAAACTATTTGAGGAAGACGGAATGCCCCAAATTGTAA
>DPOGS203316-PA
MLFLGDVFPNFTANTTAGEINFHEWLGSSWGILFSHPSDFTPVCTTELAKLLNLLPEFEKRNVKVIGLSCDSISSHIEWCKDIKSYAGCNEDEKFPYPIIEDQDRSLAKSLGMVDKDELDQKGLPLTARAVFIIDVNKKFRLSLLYPATTGRNFDEILRVIDSLQLTDKAKVATPVNWKMGDDCMVLPTIPQDQVTKFFPRGVTVVPLPSGKNYLRKTECPKL-