DPOGS203316 | ||
---|---|---|
Transcript | DPOGS203316-TA | 672 bp |
Protein | DPOGS203316-PA | 223 aa |
Genomic position | DPSCF300003 - 926415-929000 | |
RNAseq coverage | 494x (Rank: top 25%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL016629 | 4e-84 | 68.47% |   |
Bombyx | BGIBMGA012304-TA | 2e-109 | 80.72% |   |
Drosophila | Prx6005-PA | 2e-75 | 59.55% |   |
EBI UniRef50 | UniRef50_P30041 | 4e-76 | 62.27% | Peroxiredoxin-6 n=473 Tax=root RepID=PRDX6_HUMAN |
NCBI RefSeq | NP_001040104.1 | 7e-106 | 79.37% | glutathione peroxidase [Bombyx mori] |
NCBI nr blastp | gi|157313403 | 1e-106 | 80.72% | 1-Cys peroxiredoxin [Bombyx mori] |
NCBI nr blastx | gi|157313403 | 3e-107 | 80.72% | 1-Cys peroxiredoxin [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016209 | 3.5e-30 | antioxidant activity | |
GO:0055114 | 3.5e-30 | oxidation-reduction process | ||
GO:0016491 | 3.5e-30 | oxidoreductase activity | ||
GO:0051920 | 6e-12 | peroxiredoxin activity | ||
KEGG pathway | tca:659242 | 3e-83 |   | |
  | K11188 (PRDX6) | maps-> | Phenylpropanoid biosynthesis | |
  |   |   | Phenylalanine metabolism | |
  |   |   | Methane metabolism | |
InterPro domain | [1-220] IPR012336 | 1.5e-69 | Thioredoxin-like fold | |
[5-139] IPR000866 | 3.5e-30 | Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant | ||
[163-197] IPR019479 | 6e-12 | Peroxiredoxin, C-terminal | ||
Orthology group | MCL14111 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS203316-TA
ATGCTGTTTCTTGGTGATGTTTTTCCAAATTTCACAGCAAATACTACTGCAGGTGAAATAAATTTTCATGAATGGCTTGGTTCCTCTTGGGGTATCCTGTTCTCTCATCCATCTGATTTCACACCGGTCTGCACTACTGAACTGGCGAAATTACTTAATCTGCTTCCAGAGTTTGAAAAGCGGAATGTCAAGGTTATTGGCTTGTCTTGTGATTCGATTTCCTCTCATATAGAGTGGTGCAAAGATATCAAAAGCTATGCAGGCTGTAACGAAGATGAGAAGTTTCCGTACCCTATAATAGAGGATCAGGACAGAAGTCTAGCTAAGAGCCTGGGAATGGTTGATAAAGATGAATTAGACCAAAAAGGCCTGCCGCTGACTGCCAGGGCTGTATTCATTATAGATGTGAACAAGAAATTCCGTCTGTCGTTATTGTATCCTGCAACCACAGGAAGAAACTTTGATGAGATTCTCCGCGTGATAGATTCGCTGCAGCTCACTGATAAGGCTAAAGTGGCGACGCCGGTCAATTGGAAGATGGGCGATGACTGCATGGTGTTGCCAACAATACCCCAAGATCAGGTCACCAAGTTTTTCCCAAGAGGTGTCACTGTGGTGCCCCTGCCTTCGGGCAAAAACTATTTGAGGAAGACGGAATGCCCCAAATTGTAA
>DPOGS203316-PA
MLFLGDVFPNFTANTTAGEINFHEWLGSSWGILFSHPSDFTPVCTTELAKLLNLLPEFEKRNVKVIGLSCDSISSHIEWCKDIKSYAGCNEDEKFPYPIIEDQDRSLAKSLGMVDKDELDQKGLPLTARAVFIIDVNKKFRLSLLYPATTGRNFDEILRVIDSLQLTDKAKVATPVNWKMGDDCMVLPTIPQDQVTKFFPRGVTVVPLPSGKNYLRKTECPKL-